RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ITGB7	P26010	798 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	TNFRSF4	P43489	277 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	SPINT3	P49223	89 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	MLLT1	Q03111	559 aa	Predicted RBP	13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	CCDC85B	Q15834	202 aa	Predicted RBP	13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	CRY1	Q16526	586 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	FXN	Q16595	210 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	FAM46C	Q5VWP2	391 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	EGFLAM	Q63HQ2	1017 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	DLEU7	Q6UYE1	221 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	PROSER1	Q86XN7	944 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	HBEGF	Q99075	208 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	ACTL8	Q9H568	366 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	WWOX	Q9NZC7	414 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	OPTC	Q9UBM4	332 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	ANAPC2	Q9UJX6	822 aa		13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	POLR3H	Q9Y535	204 aa	Predicted RBP	13.52	□□□□□ -0.25
COPS7B-223	ENST00000611614	ANKRD28	O15084	1053 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ACOX3	O15254	700 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	TPST1	O60507	370 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	GNAO1	P09471	354 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ELFN1	P0C7U0	828 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	JAK1	P23458	1154 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	HLCS	P50747	726 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ELP6	Q0PNE2	266 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	SMAD4	Q13485	552 aa	Known RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RAB39A	Q14964	217 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	MOG	Q16653	247 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	PHKG1	Q16816	387 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	SMU1	Q2TAY7	513 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	SDE2	Q6IQ49	451 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	METTL2B	Q6P1Q9	378 aa	Known RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RNF165	Q6ZSG1	346 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	GPR26	Q8NDV2	337 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	TBC1D15	Q8TC07	691 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	CYGB	Q8WWM9	190 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RHBDF1	Q96CC6	855 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	UBE2Z	Q9H832	354 aa	Predicted RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RDH14	Q9HBH5	336 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	LATS2	Q9NRM7	1088 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	CDC14A	Q9UNH5	594 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	CCL27	Q9Y4X3	112 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	SCN8A	Q9UQD0	1980 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	C5orf42	Q9H799	3197 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614		H0YAE9	185 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	SLC28A1	O00337	649 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RGS14	O43566	566 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ATE1	O95260	518 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	POR	P16435	677 aa	Predicted RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	JUNB	P17275	347 aa	Predicted RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	C21orf59	P57076	290 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	CTBS	Q01459	385 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	PMS2P3	Q13401	168 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	TTLL9	Q3SXZ7	439 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	RFTN2	Q52LD8	501 aa	Predicted RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	CCNYL2	Q5T2Q4	361 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	DPPA4	Q7L190	304 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	PARS2	Q7L3T8	475 aa	Known RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	MMAA	Q8IVH4	418 aa	Known RBP	13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	DDHD1	Q8NEL9	900 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ULK4	Q96C45	1275 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	DCUN1D5	Q9BTE7	237 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	FAM83D	Q9H4H8	585 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	POLR1B	Q9H9Y6	1135 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZDHHC4	Q9NPG8	344 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	STON1	Q9Y6Q2	735 aa		13.51	□□□□□ -0.25
COPS7B-223	ENST00000611614	TNRC18	O15417	2968 aa	Predicted RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	AGAP14	A8MT82	685 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	C2CD4D	B7Z1M9	353 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614		K7EPI3	171 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	WDR47	O94967	919 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	CPNE6	O95741	557 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	INHBB	P09529	407 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	C1S	P09871	688 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	SLC2A4	P14672	509 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	HRH2	P25021	359 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	GDF5	P43026	501 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	RPS9	P46781	194 aa	Known RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	TMBIM6	P55061	237 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	CBX3	Q13185	183 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	MAD2L1	Q13257	205 aa	Predicted RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PWP1	Q13610	501 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	USP51	Q70EK9	711 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	BIRC7	Q96CA5	298 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PAIP1	Q9H074	479 aa	Known RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PRSS16	Q9NQE7	514 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	LIMD1	Q9UGP4	676 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRPS1	Q9UHF7	1281 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF639	Q9UID6	485 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	OAZ3	Q9UMX2	235 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	EIF3L	Q9Y262	564 aa	Known RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PCDHB3	Q9Y5E6	796 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ATP6V1G1	O75348	118 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	RSL1D1	O76021	490 aa	Known RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	LDLR	P01130	860 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	CBSL	P0DN79	551 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	VARS	P26640	1264 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms