RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 THRAP10827 490 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 LCP1P13796 627 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 CSKP41240 450 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 PLK1P53350 603 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 ARSFP54793 590 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 TSPAN31Q12999 210 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 MMRN1Q13201 1228 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 FGL2Q14314 439 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 DRAP1Q14919 205 aaPredicted RBP5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 SLC9A3R2Q15599 337 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 USP41Q3LFD5 358 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 MTSS1LQ765P7 747 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 TAS1R1Q7RTX1 841 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 NRROSQ86YC3 692 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 ZNF561Q8N587 486 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 FRMD1Q8N878 549 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 RASD2Q96D21 266 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 SGTBQ96EQ0 304 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 PDXPQ96GD0 296 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 GCNAQ96QF7 691 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 KCNA7Q96RP8 456 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 FAM213AQ9BRX8 229 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 MMP25Q9NPA2 562 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 CCNB1IP1Q9NPC3 277 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 ABCB8Q9NUT2 735 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 PTGFRNQ9P2B2 879 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 NKX1-2Q9UD57 310 aaPredicted RBP5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 ARMCX3Q9UH62 379 aaPredicted RBP5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 NFU1Q9UMS0 254 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 MAP3K2Q9Y2U5 619 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 SNX24Q9Y343 169 aa5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 MRPS18BQ9Y676 258 aaKnown RBP5.68□□□□□ -1.5
COL4A3BP-207ENST00000604926 UBE4BO95155 1302 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 A0A0A6YYC8 382 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ANKDD1BA6NHY2 528 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ERI2A8K979 691 aaKnown RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 WASH4PA8MWX3 477 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 I3L1I5 382 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 M0QZ92 97 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 SCGB2A1O75556 95 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 OR6B1O95007 311 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 LY86O95711 162 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 CALCAP01258 141 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 YES1P07947 543 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 CCL2P13500 99 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ITIH1P19827 911 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PSMB6P28072 239 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ELK4P28324 431 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 GRK4P32298 578 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 AHRP35869 848 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 MAP3K8P41279 467 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 FHITP49789 147 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 NDUFV1P49821 464 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ADKP55263 362 aaKnown RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PRSS12P56730 875 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 AP3S2P59780 193 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 GPLD1P80108 840 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 EPS8Q12929 822 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 SCGB2A2Q13296 93 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 TNFAIP1Q13829 316 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 GANABQ14697 944 aaKnown RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 EMC2Q15006 297 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 DECR1Q16698 335 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 TEX44Q53QW1 395 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ARHGAP15Q53QZ3 475 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PAN3Q58A45 887 aaKnown RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ARMCX4Q5H9R4 360 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 LDLRAP1Q5SW96 308 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 C16orf46Q6P387 395 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 FAM83HQ6ZRV2 1179 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 KANSL1Q7Z3B3 1105 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 GPR180Q86V85 440 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ACBD4Q8NC06 268 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 STXBP6Q8NFX7 210 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 OR2L8Q8NGY9 312 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 OR52J3Q8NH60 311 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 C9orf43Q8TAL5 461 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ASAP3Q8TDY4 903 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 FIG4Q92562 907 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 TMCO6Q96DC7 493 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PLEKHA8Q96JA3 519 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 BTBD9Q96Q07 612 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PNKPQ96T60 521 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 PTPN18Q99952 460 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 MXRA8Q9BRK3 442 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 RTKNQ9BST9 563 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 SMURF2Q9HAU4 748 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ENTPD7Q9NQZ7 604 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ZDHHC7Q9NXF8 308 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 SH3BP4Q9P0V3 963 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 MIOXQ9UGB7 285 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 UTP11Q9Y3A2 253 aaKnown RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 COL11A2P13942 1736 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 COL11A1P12107 1806 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 RPTORQ8N122 1335 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 FAM86C2PA6NEL3 165 aa5.67□□□□□ -1.5
COL4A3BP-207ENST00000604926 ASB14A6NK59 587 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms