RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 OR5AR1Q8NGP9 310 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 OR2L8Q8NGY9 312 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 OR2T11Q8NH01 316 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 WDR20Q8TBZ3 569 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 PYCR2Q96C36 320 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 CMTM7Q96FZ5 175 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 PDXPQ96GD0 296 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 FCRL1Q96LA6 429 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 PPP1R36Q96LQ0 422 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 C12orf66Q96MD2 445 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 ORAI3Q9BRQ5 295 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 TWSG1Q9GZX9 223 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 NT5DC2Q9H857 520 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 EFCAB1Q9HAE3 211 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 TM7SF3Q9NS93 570 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 ZNF490Q9ULM2 529 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 SIT1Q9Y3P8 196 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 PRKAB1Q9Y478 270 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 GPSM3Q9Y4H4 160 aa11.9□□□□□ -0.5
NEDD8-MDP1-203ENST00000604306 SNRNP200O75643 2136 aaKnown RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 A6NCN8 305 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 E7EQ34 232 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 FOXE1O00358 373 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 GSC2O15499 205 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 NDUFS2O75306 463 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 FKBP9O95302 570 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 NPPAP01160 153 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 TNFP01375 233 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SNRPB2P08579 225 aaKnown RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PRPS2P11908 318 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 JAK1P23458 1154 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ITPKAP23677 461 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 HRH2P25021 359 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CXCR2P25025 360 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PKLRP30613 574 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 HTR6P50406 440 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RAP1GDS1P52306 607 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CLDN2P57739 230 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PHEXP78562 749 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■□□□ 13.3
NEDD8-MDP1-203ENST00000604306 DOC2AQ14183 400 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RCAN2Q14206 197 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 NR6A1Q15406 480 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 HIST2H2ACQ16777 129 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 IMPG1Q17R60 797 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ALG11Q2TAA5 492 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 HIST2H2AA3Q6FI13 130 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PRR23BQ6ZRT6 265 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SFRP1Q8N474 314 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 FNDC5Q8NAU1 212 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 GLB1L3Q8NCI6 653 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ABHD11Q8NFV4 315 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 GPBAR1Q8TDU6 330 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SLC5A11Q8WWX8 675 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SELENOMQ8WWX9 145 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 MCUR1Q96AQ8 359 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ROPN1LQ96C74 230 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 MED8Q96G25 268 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 INSM2Q96T92 566 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 GSDMCQ9BYG8 508 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 OSGEPL1Q9H4B0 414 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 EBF2Q9HAK2 575 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 NMRK1Q9NWW6 199 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 C1orf109Q9NX04 203 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SIRT5Q9NXA8 310 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 KCNK6Q9Y257 313 aa11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 EIF3LQ9Y262 564 aaKnown RBP11.89□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 THADAQ6YHU6 1953 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 EYSQ5T1H1 3165 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CROCCQ5TZA2 2017 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 FAM221BA6H8Z2 402 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PDZK1P1A8MUH7 402 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ANKRD65E5RJM6 399 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PRAMEF4O60810 478 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PEX11AO75192 247 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RASSF9O75901 435 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CCNDBP1O95273 360 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 F3P13726 295 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 SHMT2P34897 504 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 PIK3CBP42338 1070 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CXCL12P48061 93 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 KCNJ2P63252 427 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 ABATP80404 500 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 FOXM1Q08050 763 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RPS6KA2Q15349 733 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 RPE65Q16518 533 aa11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 CPSF6Q16630 551 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEDD8-MDP1-203ENST00000604306 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms