RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SLC18A2Q05940 514 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 SLC5A12Q1EHB4 618 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 C18orf21Q32NC0 220 aaPredicted RBP21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 CAPN13Q6MZZ7 669 aaPredicted RBP21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 PRSS42Q7Z5A4 293 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 ARHGAP22Q7Z5H3 698 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 TCAIMQ8N3R3 496 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 FLVCR1-AS1Q8TAF5 88 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 PYCR2Q96C36 320 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 GRAMD1AQ96CP6 724 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 SMC6Q96SB8 1091 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 MIPEPQ99797 713 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 TWSG1Q9GZX9 223 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 IGHV5-51A0A0C4DH38 117 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 A0A0J9YY10 115 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 SLC9B1P1A6NJY1 282 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 MAP2K7O14733 419 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 PRICKLE3O43900 615 aaPredicted RBP21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 PVRP15151 417 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 CCND1P24385 295 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 CMPK1P30085 196 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 CSTF2P33240 577 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 CRHR1P34998 444 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 LSSP48449 732 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 PTCHD3Q3KNS1 767 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 OR2A1Q8NGT9 310 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 OR56A3Q8NH54 315 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 PGM2Q96G03 612 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 IQCGQ9H095 443 aaKnown RBP21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 PCBD2Q9H0N5 130 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 CNOT10Q9H9A5 744 aaKnown RBP21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 GRID1Q9ULK0 1009 aa21.33■■□□□ 1.01
CHMP2A-204ENST00000597848 SPTBN4Q9H254 2564 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 TK2O00142 265 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 TAPBPO15533 448 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 MAP3K7O43318 606 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 SMIM24O75264 130 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 CCNDBP1O95273 360 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 ANKRD34CP0C6C1 535 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 C16orf72Q14CZ0 275 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 PFKFB4Q16877 469 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 ZXDCQ2QGD7 858 aaPredicted RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 FBXO48Q5FWF7 155 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 PRAMEF13Q5VWM6 474 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 CDHR3Q6ZTQ4 885 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 CARFQ8N187 725 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 FBXO39Q8N4B4 442 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 PDPRQ8NCN5 879 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 AGBL5Q8NDL9 886 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 OR2L3Q8NG85 312 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 ESAMQ96AP7 390 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 TRAPPC9Q96Q05 1148 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 SGPP1Q9BX95 441 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 PITPNM3Q9BZ71 974 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 STMN4Q9H169 189 aaPredicted RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 ZNF768Q9H5H4 540 aaKnown RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 MRPS30Q9NP92 439 aaKnown RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 INTS7Q9NVH2 962 aaKnown RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 SOHLH2Q9NX45 425 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 SENP1Q9P0U3 644 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 PTBP2Q9UKA9 531 aaKnown RBP21.32■■□□□ 1
CHMP2A-204ENST00000597848 KLHL20Q9Y2M5 609 aa21.32■■□□□ 1
CHMP2A-204ENST00000597848 HGSO14964 777 aaPredicted RBP21.31■■□□□ 1
CHMP2A-204ENST00000597848 SPAG7O75391 227 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 FKBP9O95302 570 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 ZBTB11O95625 1053 aaPredicted RBP21.31■■□□□ 1
CHMP2A-204ENST00000597848 MTHFD2P13995 350 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 ST6GAL1P15907 406 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 GDF5P43026 501 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 HSPA7P48741 367 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 KIAA1614Q5VZ46 1190 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 ICE2Q659A1 982 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 THOC6Q86W42 341 aaKnown RBP21.31■■□□□ 1
CHMP2A-204ENST00000597848 BANPQ8N9N5 519 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 KLHL6Q8WZ60 621 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 APOPT1Q96IL0 206 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 CMKLR1Q99788 373 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 HAUS8Q9BT25 410 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 TMCO1Q9UM00 188 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 ANKRD12Q6UB98 2062 aa21.31■■□□□ 1
CHMP2A-204ENST00000597848 CCDC187A0A096LP49 1063 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 STK16O75716 305 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 IPO13O94829 963 aaKnown RBP21.3■■□□□ 1
CHMP2A-204ENST00000597848 WDR47O94967 919 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 TAC1P20366 129 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 MAGP20916 626 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 ALDH18A1P54886 795 aaKnown RBP21.3■■□□□ 1
CHMP2A-204ENST00000597848 YBX1P67809 324 aaKnown RBP21.3■■□□□ 1
CHMP2A-204ENST00000597848 HSD11B2P80365 405 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 ABATP80404 500 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 PRDX1Q06830 199 aaKnown RBP21.3■■□□□ 1
CHMP2A-204ENST00000597848 FOXR1Q6PIV2 292 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 LCTLQ6UWM7 567 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 RAB11FIP2Q7L804 512 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 FAM129CQ86XR2 697 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 KMT5CQ86Y97 462 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 LIN37Q96GY3 246 aaPredicted RBP21.3■■□□□ 1
CHMP2A-204ENST00000597848 TMEM79Q9BSE2 394 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 VIPAS39Q9H9C1 493 aa21.3■■□□□ 1
CHMP2A-204ENST00000597848 TMBIM4Q9HC24 238 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms