RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 TTI1O43156 1089 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 PRICKLE3O43900 615 aaPredicted RBP14.54□□□□□ -0.08
TGFB1-202ENST00000597453 S1PR4O95977 384 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 ALAS2P22557 587 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 MCM3P25205 808 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 IVDP26440 423 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 ARNTP27540 789 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 GRIA3P42263 894 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 BDKRB1P46663 353 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 CTSL3PQ5NE16 218 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 DCAF10Q5QP82 559 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 CES3Q6UWW8 571 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 TTLL10Q6ZVT0 673 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 HPS6Q86YV9 775 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 SPATA4Q8NEY3 305 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 PNPLA2Q96AD5 504 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 SLC22A18Q96BI1 424 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 PTERQ96BW5 349 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 FER1L6-AS2Q96M78 137 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 IP6K3Q96PC2 410 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 SLAMF7Q9NQ25 335 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 SAMD15Q9P1V8 674 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.54□□□□□ -0.08
TGFB1-202ENST00000597453 GNPTGQ9UJJ9 305 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 SLC39A10Q9ULF5 831 aa14.54□□□□□ -0.08
TGFB1-202ENST00000597453 MDC1Q14676 2089 aaKnown RBP14.54□□□□□ -0.08
TGFB1-202ENST00000597453 FAM237BA0A1B0GVD1 139 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 A0A1B0GX78 115 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 MAGEB16A2A368 324 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 SDR42E2A6NKP2 422 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 TCP11X1B4DZS4 312 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 PEX12O00623 359 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 C1orf105O95561 183 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 RPS3P23396 243 aaKnown RBP eCLIP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 PSMB5P28074 263 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 MYBPC3Q14896 1274 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 MORF4L2Q15014 288 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 SF1Q15637 639 aaKnown RBP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 KIAA0930Q6ICG6 404 aaPredicted RBP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 CASC4Q6P4E1 433 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 FIGLAQ6QHK4 219 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 ZNF572Q7Z3I7 529 aaPredicted RBP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 GALNT16Q8N428 558 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 CLEC1AQ8NC01 280 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 DENND1AQ8TEH3 1009 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 MFSD3Q96ES6 412 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 PANX3Q96QZ0 392 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 KRT12Q99456 494 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 TRIM51Q9BSJ1 452 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 ZNF552Q9H707 407 aaPredicted RBP14.53□□□□□ -0.08
TGFB1-202ENST00000597453 C5AR2Q9P296 337 aa14.53□□□□□ -0.08
TGFB1-202ENST00000597453 CNTRLQ7Z7A1 2325 aa14.52□□□□□ -0.08
TGFB1-202ENST00000597453 GOLGA8KD6RF30 607 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 GOLGA8TH3BQL2 631 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 SMAPO00193 183 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 NRP2O60462 931 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 CTSVO60911 334 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 SEMA7AO75326 666 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 NDUFS3O75489 264 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 AGFG2O95081 481 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 VAPBO95292 243 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 TUBB4AP04350 444 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 CD63P08962 238 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 RNF224P0DH78 156 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 PAMP19021 973 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 EIF3BP55884 814 aaKnown RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 C2orf54Q08AI8 447 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 MRPL49Q13405 166 aaKnown RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 PLEKHN1Q494U1 663 aaPredicted RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 FHL5Q5TD97 284 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 CNSTQ6PJW8 725 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 COX15Q7KZN9 410 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 OTOAQ7RTW8 1153 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 LRRC6Q86X45 466 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 DTWD1Q8N5C7 304 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 METTL27Q8N6F8 245 aaPredicted RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 SKA2Q8WVK7 121 aaPredicted RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 LPGAT1Q92604 370 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 DLG3Q92796 817 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 FKBP10Q96AY3 582 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 RAD51AP1Q96B01 352 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 C19orf60Q96EN9 201 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 SNF8Q96H20 258 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 ZNF285Q96NJ3 590 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 BIRC8Q96P09 236 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 SPSB2Q99619 263 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 MIPEPQ99797 713 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 ZBTB20Q9HC78 741 aaPredicted RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 CUTCQ9NTM9 273 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 INTS7Q9NVH2 962 aaKnown RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 TSR3Q9UJK0 312 aaKnown RBP14.52□□□□□ -0.09
TGFB1-202ENST00000597453 UNC79Q9P2D8 2635 aa14.52□□□□□ -0.09
TGFB1-202ENST00000597453 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
TGFB1-202ENST00000597453 A0A1W2PPV9 198 aa14.51□□□□□ -0.09
TGFB1-202ENST00000597453 FAM187AA6NFU0 413 aa14.51□□□□□ -0.09
TGFB1-202ENST00000597453 KIF2AO00139 706 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms