RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 HDDC3Q8N4P3 179 aa12.98□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OXR1Q8N573 874 aa12.98□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TRPV4Q9HBA0 871 aa12.98□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
RAB11FIP4-210ENST00000585058 IGSF9Q9P2J2 1179 aa12.98□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ITGA10O75578 1167 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PRKD3O94806 890 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CYP11A1P05108 521 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CDH1P12830 882 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 EDNRAP25101 427 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CCNFP41002 786 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DAG1Q14118 895 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DSC3Q14574 896 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DPY19L1Q2PZI1 675 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OGFRL1Q5TC84 451 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PLCZ1Q86YW0 608 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 LGI4Q8N135 537 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC22A17Q8WUG5 538 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TFB2MQ9H5Q4 396 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZNF358Q9NW07 568 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FZD4Q9ULV1 537 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZNF8P17098 575 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC7A1P30825 629 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GJA8P48165 433 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GAD2Q05329 585 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 LRRC32Q14392 662 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLBPQ14493 270 aaKnown RBP eCLIP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ACSBG2Q5FVE4 666 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CEP97Q8IW35 865 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC30A8Q8IWU4 369 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 METTL8Q9H825 291 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TAS2R1Q9NYW7 299 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 A8MUA0 341 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GABRDO14764 452 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RB1P06400 928 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CKMT2P17540 419 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CSKP41240 450 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MARCH9Q86YJ5 346 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PRICKLE1Q96MT3 831 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PDLIM1O00151 329 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TLR4O00206 839 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SMAD9O15198 467 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FUT2Q10981 343 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZNF878C9JN71 531 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NIPSNAP2O75323 286 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 INMTO95050 263 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CCR8P51685 355 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SGCBQ16585 318 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PAQR3Q6TCH7 311 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MBOAT1Q6ZNC8 495 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SCAMP5Q8TAC9 235 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CCDC107Q8WV48 283 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZSCAN5AQ9BUG6 496 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TBL1XR1Q9BZK7 514 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OAZ3Q9UMX2 235 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MAFBQ9Y5Q3 323 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZNF726A6NNF4 738 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PPEF2O14830 753 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CAPN15O75808 1086 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 KAT7O95251 611 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TACSTD2P09758 323 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ENGP17813 658 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CXCR1P25024 350 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FOXN2P32314 431 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DSTNP60981 165 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FAM110CQ1W6H9 321 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OVCA2Q8WZ82 227 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NUS1Q96E22 293 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GAS2L1Q99501 681 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TMED9Q9BVK6 235 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A6P19224 532 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 HK1P19367 917 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A1P22309 533 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A4P22310 534 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 S100A2P29034 98 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ARL9Q6T311 187 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NUDT13Q86X67 352 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NXPE2Q96DL1 559 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OR6C70A6NIJ9 312 aa12.96□□□□□ -0.34
RAB11FIP4-210ENST00000585058 SLC22A2O15244 555 aa12.96□□□□□ -0.34
RAB11FIP4-210ENST00000585058 SLC22A1O15245 554 aa12.96□□□□□ -0.34
RAB11FIP4-210ENST00000585058 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.34
RAB11FIP4-210ENST00000585058 IMPDH1P20839 514 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms