RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLX1AQ9BQ83 275 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 BPIFA3Q9BQP9 254 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RTP3Q9BQQ7 232 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SRSF8Q9BRL6 282 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DCLK3Q9C098 648 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LHPPQ9H008 270 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GOLPH3LQ9H4A5 285 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RAD21L1Q9H4I0 556 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ACTR5Q9H9F9 607 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PARVGQ9HBI0 331 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZDHHC4Q9NPG8 344 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SPG21Q9NZD8 308 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 UPB1Q9UBR1 384 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 FBXL5Q9UKA1 691 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RALYQ9UKM9 306 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 B3GNT3Q9Y2A9 372 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.89□□□□□ -2.117e-7■■□□□ 12
SMCHD1-211ENST00000584897 IKBKGQ9Y6K9 419 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LAMA2P24043 3122 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 COL5A1P20908 1838 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SF3B1O75533 1304 aaKnown RBP eCLIP1.89□□□□□ -2.112e-7■■■■■ 90.4
SMCHD1-211ENST00000584897 ADGRA3Q8IWK6 1321 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MKI67P46013 3256 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RANBP2P49792 3224 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 E9PAM4 449 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RHODO00212 210 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAM20O43506 726 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MED7O43513 233 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB14O43829 449 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TOM1L1O75674 476 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CRYABP02511 175 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LCKP06239 509 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TPM1P09493 284 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TYK2P29597 1187 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CDAP32320 146 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CCT6AP40227 531 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PTPN9P43378 593 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ACADSBP45954 432 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CLK3P49761 638 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ENTPD1P49961 510 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RAD23AP54725 363 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KRTAP10-11P60412 298 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SP2Q02086 613 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB16Q05516 673 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 HSPB3Q12988 150 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MTAPQ13126 283 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SNTB1Q13884 538 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DNAJC21Q5F1R6 531 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TOR1AIP1Q5JTV8 583 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 NCAPH2Q6IBW4 605 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PLEKHA7Q6IQ23 1121 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ALKBH5Q6P6C2 394 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KYAT3Q6YP21 454 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 STRADAQ7RTN6 431 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CATSPER4Q7RTX7 472 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MAVSQ7Z434 540 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 HAUS6Q7Z4H7 955 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KBTBD6Q86V97 674 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CAMK1DQ8IU85 385 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GUF1Q8N442 669 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MINDY1Q8N5J2 469 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KDM1BQ8NB78 822 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 C7orf57Q8NEG2 295 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GJC3Q8NFK1 279 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MYCBPAPQ8TBZ2 947 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SPPL2BQ8TCT7 592 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LPGAT1Q92604 370 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPL38Q96DV4 380 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ANKRD36BP1Q96IX9 119 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TAAR1Q96RJ0 339 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 HSD17B14Q9BPX1 270 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 C19orf43Q9BQ61 176 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 C16orf70Q9BSU1 422 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PI4K2AQ9BTU6 479 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 FNDC11Q9BVV2 318 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SCNM1Q9BWG6 230 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 FZD8Q9H461 694 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 AAMDCQ9H7C9 122 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 C8orf33Q9H7E9 229 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 AGPAT5Q9NUQ2 364 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SEPT10Q9P0V9 454 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 COPG2Q9UBF2 871 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 INTS6Q9UL03 887 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DNPEPQ9ULA0 475 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 NEUROG3Q9Y4Z2 214 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 BZW2Q9Y6E2 419 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CAPN7Q9Y6W3 813 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ARID2Q68CP9 1835 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 IGKV2D-30A0A075B6S6 120 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 A0A1B0GVL5 298 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TARSL2A2RTX5 802 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CDRT15L2A8MXV6 281 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNU1A8MYU2 1149 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PGRMC2O15173 223 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 OGTO15294 1046 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TNFSF14O43557 240 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ATG13O75143 517 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CNTN5O94779 1100 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 C22orf31O95567 290 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms