RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 HTRA2O43464 458 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 PRKNO60260 465 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 MLYCDO95822 493 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 EGFP01133 1207 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PRNPP04156 253 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 UROSP10746 265 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 C9orf64Q5T6V5 341 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 SDE2Q6IQ49 451 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 STK32CQ86UX6 486 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 FAM86B1Q8N7N1 296 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 TFGQ92734 400 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 EXOSC8Q96B26 276 aaKnown RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 SIPA1Q96FS4 1042 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 YIPF2Q9BWQ6 316 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 DPEP2Q9H4A9 486 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 RERGLQ9H628 205 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 TRIM39Q9HCM9 518 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 STARD5Q9NSY2 213 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 CUEDC1Q9NWM3 386 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 ZNF510Q9Y2H8 683 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 RP1P56715 2156 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PRAMEF4O60810 478 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 OLFM2O95897 454 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 KRT6AP02538 564 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 KRT6BP04259 564 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 S100A3P33764 101 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 CRATP43155 626 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 KRT6CP48668 564 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 IRX1P78414 480 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 CREMQ03060 361 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 CACHD1Q5VU97 1274 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PRAMEF9Q5VWM5 478 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 ZBTB49Q6ZSB9 765 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 ERN2Q76MJ5 926 aaKnown RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 LILRA2Q8N149 483 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 FRS2Q8WU20 508 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 LRRC58Q96CX6 371 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 HHIPQ96QV1 700 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PKP4Q99569 1192 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 IKZF5Q9H5V7 419 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 COQ10BQ9H8M1 238 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 VAPAQ9P0L0 249 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 LNPEPQ9UIQ6 1025 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 AP4S1Q9Y587 144 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 SLCO1B7G3V0H7 640 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 CASC3O15234 703 aaKnown RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 H2AFYO75367 372 aaKnown RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 ETHE1O95571 254 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 ACTR1BP42025 376 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 ACTR1AP61163 376 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 OLR1P78380 273 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 LPAL2Q16609 132 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 HNRNPA1L2Q32P51 320 aaKnown RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 WASHC2DQ5SRD0 308 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PARGQ86W56 976 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 DTWD1Q8N5C7 304 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 SMYD1Q8NB12 490 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 BTN2A2Q8WVV5 523 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 HAUS8Q9BT25 410 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PCDHB1Q9Y5F3 818 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 PCDHGA7Q9Y5G6 932 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 FNDC1Q4ZHG4 1894 aaPredicted RBP9.99□□□□□ -0.81
RFFL-212ENST00000584655 OR1F1O43749 312 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CDC123O75794 336 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 PENKP01210 267 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 SLC19A1P41440 591 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 VAC14Q08AM6 782 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 HSPB3Q12988 150 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CST6Q15828 149 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 WSCD2Q2TBF2 565 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 DEFB110Q30KQ9 67 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFFL-212ENST00000584655 BRAT1Q6PJG6 821 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 OR4N5Q8IXE1 308 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 SLC15A3Q8IY34 581 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFFL-212ENST00000584655 F2RL3Q96RI0 385 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ACPTQ9BZG2 426 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ABCG4Q9H172 646 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RUBCNLQ9H714 662 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 AMBNQ9NP70 447 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CMTM6Q9NX76 183 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ANKRD36A6QL64 1941 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 MYLKQ15746 1914 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RALGAPA2Q2PPJ7 1873 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ANXA4P09525 319 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 NUDT7P0C024 238 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PVRP15151 417 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CDKN2CP42773 168 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 OR1E2P47887 323 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 GSK3BP49841 420 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 TBPL1P62380 186 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PPP2CBP62714 309 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PPP2CAP67775 309 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ELAVL3Q14576 367 aaKnown RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 UGT3A2Q3SY77 523 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ZNF786Q8N393 782 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CBR4Q8N4T8 237 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms