RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 FLRT3Q9NZU0 649 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 TCF19Q9Y242 345 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 IGHV4-61A0A0C4DH41 118 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 GRID2O43424 1007 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 PCDH7O60245 1069 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 TRMUO75648 421 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 ATP6AP2O75787 350 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 IGHV4-59P01825 116 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 AMBPP02760 352 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 EDN1P05305 212 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 SP1P08047 785 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 TCEA1P23193 301 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 PSMA3P25788 255 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 CHRNB4P30926 498 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 HOXC8P31273 242 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 TLX1P31314 330 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 CSTF2P33240 577 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 HSD17B3P37058 310 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 MAZP56270 477 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 MTCP1P56278 107 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 DLK1P80370 383 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 CTU2Q2VPK5 515 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 LBHQ53QV2 105 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 SLC25A53Q5H9E4 307 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 C20orf194Q5TEA3 1177 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 MOXD1Q6UVY6 613 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 C15orf39Q6ZRI6 1047 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 PIGZQ86VD9 579 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 RYBPQ8N488 228 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 OR10Q1Q8NGQ4 319 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 OR4C3Q8NH37 302 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 GOT1L1Q8NHS2 421 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 EXOC4Q96A65 974 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 ZNF501Q96CX3 271 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 INTS14Q96SY0 518 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 ADPGKQ9BRR6 497 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 ZMYND12Q9H0C1 365 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 SHARPINQ9H0F6 387 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 SNX25Q9H3E2 840 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 TRPV4Q9HBA0 871 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 GSN-AS1Q9NRJ2 163 aa5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 INTS10Q9NVR2 710 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-219ENST00000583294 A0A1W2PPW3 197 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 PRR23AA6NEV1 266 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 SNX3O60493 162 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 MOCS3O95396 460 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM58BPP0C7Q3 252 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 PRSS56P0CW18 603 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 MYL6BP14649 208 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 ANOS1P23352 680 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 HOXC13P31276 330 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 CDKN1AP38936 164 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 VAMP7P51809 220 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 KCNJ10P78508 379 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 RBP5P82980 135 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 KLC1Q07866 573 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 RASGEF1BQ0VAM2 473 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 LRRC73Q5JTD7 316 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 FFAR4Q5NUL3 377 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 C9orf50Q5SZB4 431 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 MPP7Q5T2T1 576 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 HECTD3Q5T447 861 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM91A1Q658Y4 838 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM53AQ6NSI3 398 aaPredicted RBP5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 SPATA19Q7Z5L4 167 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 GLRX5Q86SX6 157 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 ZNF329Q86UD4 541 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 KLHDC8BQ8IXV7 354 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 OR8H3Q8N146 312 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 NDUFAF2Q8N183 169 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 RASGEF1AQ8N9B8 481 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 DEPDC1BQ8WUY9 529 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 HEXDCQ8WVB3 486 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 HPSE2Q8WWQ2 592 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 CITED2Q99967 270 aaPredicted RBP5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 FSD1Q9BTV5 496 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 PANK2Q9BZ23 570 aa5.03□□□□□ -1.6
SMARCE1-219ENST00000583294 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 TRAV24A0A0B4J272 114 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 HTR3EA5X5Y0 456 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 WDR46O15213 610 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 PATE4P0C8F1 98 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 TUBB4BP68371 445 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 SP3Q02447 781 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 PTGISQ16647 500 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 KRTAP24-1Q3LI83 254 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 SLC35D3Q5M8T2 416 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 OR4A47Q6IF82 309 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 KLHDC1Q8N7A1 406 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 TRIM58Q8NG06 486 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 OR13C3Q8NGS6 347 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 FBXO17Q96EF6 278 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 GIMAP5Q96F15 307 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 HES6Q96HZ4 224 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 F2RL3Q96RI0 385 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 ZWILCHQ9H900 591 aa5.02□□□□□ -1.61
SMARCE1-219ENST00000583294 A0A087WV48 116 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms