RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 LRRK2Q5S007 2527 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 TCRBV7S3A2A0A539 114 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 DPM1O60762 260 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 ESR1P03372 595 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 OGNP20774 298 aaKnown RBP20.08■□□□□ 0.81
CCDC42-203ENST00000581598 EIF3BP55884 814 aaKnown RBP20.08■□□□□ 0.81
CCDC42-203ENST00000581598 SRSF1Q07955 248 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCDC42-203ENST00000581598 TCTE1Q5JU00 501 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 TEX35Q5T0J7 233 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 FCRL6Q6DN72 434 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 RAB42Q8N4Z0 105 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 LMNTD1Q8N9Z9 388 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 MAGEC3Q8TD91 643 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 FKBP10Q96AY3 582 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 NACC2Q96BF6 587 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 PTERQ96BW5 349 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 FER1L6-AS2Q96M78 137 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 FOPNLQ96NB1 174 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 ERP44Q9BS26 406 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 NUDT9Q9BW91 350 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 IRAK4Q9NWZ3 460 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 GPR83Q9NYM4 423 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 C5AR2Q9P296 337 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 KLHL20Q9Y2M5 609 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 PTRH2Q9Y3E5 179 aaKnown RBP20.08■□□□□ 0.81
CCDC42-203ENST00000581598 NFS1Q9Y697 457 aa20.08■□□□□ 0.81
CCDC42-203ENST00000581598 A0A1B0GX78 115 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 TTLL8A6PVC2 850 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 KLHL41O60662 606 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 CNOT3O75175 753 aaKnown RBP20.07■□□□□ 0.8
CCDC42-203ENST00000581598 IVDP26440 423 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 OTX2P32243 289 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 SF1Q15637 639 aaKnown RBP20.07■□□□□ 0.8
CCDC42-203ENST00000581598 KCTD19Q17RG1 926 aaPredicted RBP20.07■□□□□ 0.8
CCDC42-203ENST00000581598 NADK2Q4G0N4 442 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 DUPD1Q68J44 220 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 C2orf73Q8N5S3 287 aaPredicted RBP20.07■□□□□ 0.8
CCDC42-203ENST00000581598 RAB17Q9H0T7 212 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 SLC22A11Q9NSA0 550 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 SPATA7Q9P0W8 599 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 ANKMY1Q9P2S6 941 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 CIDEBQ9UHD4 219 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 DMGDHQ9UI17 866 aaKnown RBP20.07■□□□□ 0.8
CCDC42-203ENST00000581598 SHANK1Q9Y566 2161 aa20.07■□□□□ 0.8
CCDC42-203ENST00000581598 MATN4O95460 622 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 ALBP02768 609 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 PIM1P11309 404 aaPredicted RBP20.06■□□□□ 0.8
CCDC42-203ENST00000581598 MLNP12872 115 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 PAMP19021 973 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 BDKRB1P46663 353 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 TRIP13Q15645 432 aaPredicted RBP20.06■□□□□ 0.8
CCDC42-203ENST00000581598 DCAF10Q5QP82 559 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 CES3Q6UWW8 571 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 TAX1BP1Q86VP1 789 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 OTUD6BQ8N6M0 293 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 GALNT11Q8NCW6 608 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 CPT1CQ8TCG5 803 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 SLC26A1Q9H2B4 701 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 ASIC3Q9UHC3 531 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 VPS9D1Q9Y2B5 631 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 MAP4K5Q9Y4K4 846 aa20.06■□□□□ 0.8
CCDC42-203ENST00000581598 RP1L1Q8IWN7 2480 aaPredicted RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 MAGEB16A2A368 324 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 FITM1A5D6W6 292 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 PEX12O00623 359 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 DSCR3O14972 297 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 SRPX2O60687 465 aaPredicted RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 UMODP07911 640 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 ERGP11308 486 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 FMO4P31512 558 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 GRIA3P42263 894 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 SOX8P57073 446 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 SLC7A5Q01650 507 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 GPS1Q13098 491 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 GRM7Q14831 915 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 NAA25Q14CX7 972 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 CYP2A13Q16696 494 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 VWA5B1Q5TIE3 1220 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 JMJD6Q6NYC1 403 aaPredicted RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 TTLL10Q6ZVT0 673 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 CAND1Q86VP6 1230 aaKnown RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 CILP2Q8IUL8 1156 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 FAM26EQ8N5C1 309 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 EFCAB3Q8N7B9 438 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 MCUQ8NE86 351 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 WDR54Q9H977 334 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 INTS10Q9NVR2 710 aaKnown RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 P4HTMQ9NXG6 502 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 IL1RAPL1Q9NZN1 696 aa20.05■□□□□ 0.8
CCDC42-203ENST00000581598 UTP11Q9Y3A2 253 aaKnown RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 SPENQ96T58 3664 aaKnown RBP20.05■□□□□ 0.8
CCDC42-203ENST00000581598 FAM237BA0A1B0GVD1 139 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 A0A1W2PPV9 198 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 NIPSNAP2O75323 286 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 ITGAXP20702 1163 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 ALAS2P22557 587 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 VARSP26640 1264 aaKnown RBP20.04■□□□□ 0.8
CCDC42-203ENST00000581598 VPS41P49754 854 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 MYBPC3Q14896 1274 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 CCSMST1Q4G0I0 132 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms