RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GRK2P25098 689 aa15□□□□□ -0.01
SS18-216ENST00000580751 NFKB2Q00653 900 aa15□□□□□ -0.01
SS18-216ENST00000580751 TARDBPQ13148 414 aaKnown RBP eCLIP15□□□□□ -0.01
SS18-216ENST00000580751 EIF3IQ13347 325 aaKnown RBP15□□□□□ -0.01
SS18-216ENST00000580751 KIR2DS3Q14952 304 aa15□□□□□ -0.01
SS18-216ENST00000580751 CYP2A13Q16696 494 aa15□□□□□ -0.01
SS18-216ENST00000580751 PHKG1Q16816 387 aa15□□□□□ -0.01
SS18-216ENST00000580751 SBSNQ6UWP8 590 aa15□□□□□ -0.01
SS18-216ENST00000580751 ZNF574Q6ZN55 896 aaPredicted RBP15□□□□□ -0.01
SS18-216ENST00000580751 FRA10AC1Q70Z53 315 aa15□□□□□ -0.01
SS18-216ENST00000580751 PRSS42Q7Z5A4 293 aa15□□□□□ -0.01
SS18-216ENST00000580751 B3GNT8Q7Z7M8 397 aa15□□□□□ -0.01
SS18-216ENST00000580751 CCDC63Q8NA47 563 aa15□□□□□ -0.01
SS18-216ENST00000580751 LINC01555Q8NAE3 123 aa15□□□□□ -0.01
SS18-216ENST00000580751 DLG3Q92796 817 aa15□□□□□ -0.01
SS18-216ENST00000580751 SLC22A18Q96BI1 424 aa15□□□□□ -0.01
SS18-216ENST00000580751 LIN37Q96GY3 246 aaPredicted RBP15□□□□□ -0.01
SS18-216ENST00000580751 SCYL1Q96KG9 808 aa15□□□□□ -0.01
SS18-216ENST00000580751 CCDC74BQ96LY2 380 aa15□□□□□ -0.01
SS18-216ENST00000580751 CCDC138Q96M89 665 aa15□□□□□ -0.01
SS18-216ENST00000580751 IL17FQ96PD4 163 aa15□□□□□ -0.01
SS18-216ENST00000580751 TWSG1Q9GZX9 223 aa15□□□□□ -0.01
SS18-216ENST00000580751 SEMA6CQ9H3T2 930 aa15□□□□□ -0.01
SS18-216ENST00000580751 AKAP7Q9P0M2 348 aaPredicted RBP15□□□□□ -0.01
SS18-216ENST00000580751 TMEM9Q9P0T7 183 aa15□□□□□ -0.01
SS18-216ENST00000580751 XPR1Q9UBH6 696 aa15□□□□□ -0.01
SS18-216ENST00000580751 PTPRBP23467 1997 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 KRT87PA6NCN2 255 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 TLCD2A6NGC4 264 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 CDC7O00311 574 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SHOX2O60902 331 aaPredicted RBP14.99□□□□□ -0.01
SS18-216ENST00000580751 RASSF9O75901 435 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SLC16A8O95907 504 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 MYL2P10916 166 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 ATP5F1P24539 256 aaPredicted RBP14.99□□□□□ -0.01
SS18-216ENST00000580751 MPSTP25325 297 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SERPINB5P36952 375 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 PNLIPRP1P54315 467 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 DNAJB13P59910 316 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 PPP1CAP62136 330 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 CDKL1Q00532 357 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 TSNQ15631 228 aaKnown RBP14.99□□□□□ -0.01
SS18-216ENST00000580751 PPP1R3AQ16821 1122 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SNAP47Q5SQN1 464 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 METTL2BQ6P1Q9 378 aaKnown RBP14.99□□□□□ -0.01
SS18-216ENST00000580751 FAM92BQ6ZTR7 304 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SYTL1Q8IYJ3 562 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 ATL1Q8WXF7 558 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 SMPDL3AQ92484 453 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 NRTNQ99748 197 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 OXSMQ9NWU1 459 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 ARL15Q9NXU5 204 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 ACTR10Q9NZ32 417 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 KLHL3Q9UH77 587 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 IKZF3Q9UKT9 509 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 OARD1Q9Y530 152 aa14.99□□□□□ -0.01
SS18-216ENST00000580751 FAM149AA5PLN7 773 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ISM1B1AKI9 464 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 G3V2L1 256 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 TRIM13O60858 407 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 SMIM24O75264 130 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 FKBP9O95302 570 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 TOP3BO95985 862 aaKnown RBP14.98□□□□□ -0.01
SS18-216ENST00000580751 UGT2B7P16662 529 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 PRDX3P30048 256 aaKnown RBP14.98□□□□□ -0.01
SS18-216ENST00000580751 CACHD1Q5VU97 1274 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ATG16L1Q676U5 607 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 C16orf46Q6P387 395 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 SPESP1Q6UW49 350 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ARHGAP22Q7Z5H3 698 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 HOMEZQ8IX15 550 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 SPATA6LQ8N4H0 392 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 MGARPQ8TDB4 240 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ZNF480Q8WV37 535 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 PTERQ96BW5 349 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ATOH8Q96SQ7 321 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 CMKLR1Q99788 373 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 PAIP2Q9BPZ3 127 aaKnown RBP14.98□□□□□ -0.01
SS18-216ENST00000580751 SCNM1Q9BWG6 230 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 PITPNM3Q9BZ71 974 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 UNKQ9C0B0 810 aaKnown RBP14.98□□□□□ -0.01
SS18-216ENST00000580751 ALG9Q9H6U8 611 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 C1GALT1Q9NS00 363 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 SPHK1Q9NYA1 384 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 STOX2Q9P2F5 926 aaPredicted RBP14.98□□□□□ -0.01
SS18-216ENST00000580751 RNF112Q9ULX5 631 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 WASF3Q9UPY6 502 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 NEUROG3Q9Y4Z2 214 aa14.98□□□□□ -0.01
SS18-216ENST00000580751 CCDC187A0A096LP49 1063 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 TK2O00142 265 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 KLK8O60259 260 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 IPO13O94829 963 aaKnown RBP14.97□□□□□ -0.01
SS18-216ENST00000580751 ANXA5P08758 320 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 SBK3P0C264 359 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 CDH3P22223 829 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 IMPA1P29218 277 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 CSTF2P33240 577 aaKnown RBP eCLIP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms