RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 RGS4P49798 205 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 ZNF572Q7Z3I7 529 aaPredicted RBP23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 ZBED8Q8IZ13 594 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 LMNTD1Q8N9Z9 388 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 CT55Q8WUE5 264 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 MR1Q95460 341 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 NDNQ99608 321 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 PLAC1Q9HBJ0 212 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 CDC23Q9UJX2 597 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 CORO1CQ9ULV4 474 aaPredicted RBP23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 PLAAQ9Y263 795 aa23.91■■□□□ 1.42
CDC42EP4-205ENST00000580315 MYO1CO00159 1063 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 ZBTB14O43829 449 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 KATNA1O75449 491 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 OR2B3O76000 313 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 GABRB3P28472 473 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 CBLBQ13191 982 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 DNASE1L3Q13609 305 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 ARHGAP19Q14CB8 494 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 CYP2A13Q16696 494 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 DUPD1Q68J44 220 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 TRMT10BQ6PF06 316 aaKnown RBP23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 CPNE9Q8IYJ1 553 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 DENND1AQ8TEH3 1009 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 IRAK4Q9NWZ3 460 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 ZFATQ9P243 1243 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 PLCL2Q9UPR0 1127 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 TP53TG5Q9Y2B4 290 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 PCDHGA6Q9Y5G7 932 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 AP1M2Q9Y6Q5 423 aa23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 USP9XQ93008 2570 aaPredicted RBP23.9■■□□□ 1.42
CDC42EP4-205ENST00000580315 URI1O94763 535 aaPredicted RBP23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 GP1BBP13224 206 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 MCM3P25205 808 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 CAV1Q03135 178 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 MGAT5Q09328 741 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 KLRB1Q12918 225 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 GPS2Q13227 327 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 DEFB110Q30KQ9 67 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 PRAMEF17Q5VTA0 474 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 FAM20CQ8IXL6 584 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 DNAJC22Q8N4W6 341 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 FBXO15Q8NCQ5 510 aaPredicted RBP23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 ASB11Q8WXH4 323 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 GPR87Q9BY21 358 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 KLHL20Q9Y2M5 609 aa23.89■■□□□ 1.41
CDC42EP4-205ENST00000580315 SPENQ96T58 3664 aaKnown RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 KRT87PA6NCN2 255 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 K7EM74 188 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 MEN1O00255 615 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 EIF3HO15372 352 aaKnown RBP eCLIP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 ZNF749O43361 778 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 PRICKLE3O43900 615 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 NR1D1P20393 614 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 GABRA4P48169 554 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 RPS15P62841 145 aaKnown RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 ERV3-1Q14264 604 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 NAA25Q14CX7 972 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 FASTKD3Q14CZ7 662 aaKnown RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 FAM199XQ6PEV8 388 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 FIGLAQ6QHK4 219 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 PIWIL4Q7Z3Z4 852 aaKnown RBP23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 PALM2Q8IXS6 379 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 GPATCH11Q8N954 259 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 SLC38A9Q8NBW4 561 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 PYROXD1Q8WU10 500 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 SMPDL3AQ92484 453 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 ZUFSPQ96AP4 578 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 SLC17A6Q9P2U8 582 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 MAN2B2Q9Y2E5 1009 aa23.88■■□□□ 1.41
CDC42EP4-205ENST00000580315 GFYI3L273 518 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 SYF2O95926 243 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 FURINP09958 794 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 ERGP11308 486 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 PDAP1Q13442 181 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 WHAMMP3Q1A5X7 153 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 ZC3H12BQ5HYM0 836 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 RBM20Q5T481 1227 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 TLDC1Q6P9B6 456 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 CYHR1Q6ZMK1 362 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 UBE2R2Q712K3 238 aaPredicted RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 DSELQ8IZU8 1212 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 FAM26EQ8N5C1 309 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 SEC14L1Q92503 715 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 ZNF592Q92610 1267 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 MIB2Q96AX9 1013 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 PKP4Q99569 1192 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 MIPEPQ99797 713 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 DPH2Q9BQC3 489 aaPredicted RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 SAYSD1Q9NPB0 183 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 PCMTD2Q9NV79 361 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 NSMCE4AQ9NXX6 385 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 EURLQ9NYK6 297 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 GRHL1Q9NZI5 618 aa23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 UTP20O75691 2785 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-205ENST00000580315 TARM1B6A8C7 271 aa23.86■■□□□ 1.41
CDC42EP4-205ENST00000580315 MKRN2OSH3BPM6 223 aa23.86■■□□□ 1.41
CDC42EP4-205ENST00000580315 TUBB4AP04350 444 aa23.86■■□□□ 1.41
CDC42EP4-205ENST00000580315 CMPK1P30085 196 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms