RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TNPO3Q9Y5L0 923 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 COLEC10Q9Y6Z7 277 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PDZK1P1A8MUH7 402 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ARHGEF33A8MVX0 844 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 KLF11O14901 512 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 DLX3O60479 287 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TRIM13O60858 407 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SMIM24O75264 130 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 EML2O95834 649 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ANXA5P08758 320 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 MYL2P10916 166 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 MTHFD1P11586 935 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 IMPDH1P20839 514 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 MPLP40238 635 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 MDH1P40925 334 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 ALDH18A1P54886 795 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 IL9RQ01113 521 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ASPHQ12797 758 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PHKG1Q16816 387 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 HLA-BQ31612 363 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TRIM61Q5EBN2 209 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 HHATQ5VTY9 493 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SULT1C3Q6IMI6 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SLC30A9Q6PML9 568 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RGS9BPQ6ZS82 235 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 KANSL1Q7Z3B3 1105 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 NUDCD3Q8IVD9 361 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 DCUN1D3Q8IWE4 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SLC25A45Q8N413 288 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SFRP1Q8N474 314 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ANKRD42Q8N9B4 389 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 CCDC63Q8NA47 563 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ZNF548Q8NEK5 533 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PRSS33Q8NF86 280 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 OR9A1PQ8NGU1 263 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RAB3IL1Q8TBN0 382 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 LMX1AQ8TE12 382 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SAP25Q8TEE9 199 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ATL1Q8WXF7 558 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RHBDF1Q96CC6 855 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 C12orf66Q96MD2 445 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TM9SF2Q99805 663 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 NUSAP1Q9BXS6 441 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 UNKQ9C0B0 810 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 TWSG1Q9GZX9 223 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TRIT1Q9H3H1 467 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 OSGEPL1Q9H4B0 414 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 CCDC134Q9H6E4 229 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ZNF624Q9P2J8 865 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 PSMD13Q9UNM6 376 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 EML5Q05BV3 1969 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 SDK1Q7Z5N4 2213 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ATXN2Q99700 1313 aaKnown RBP7.77□□□□□ -1.17
COPS3-215ENST00000578317 NPEPPSL1A6NEC2 478 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 A8MT66 165 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 UBXN8O00124 270 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 PCDHGA12O60330 932 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 KDM1AO60341 852 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 SNX2O60749 519 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 SNUPNO95149 360 aaKnown RBP7.77□□□□□ -1.17
COPS3-215ENST00000578317 HTR3BO95264 441 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 CFIP05156 583 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ANXA6P08133 673 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ZNF806P0C7X5 589 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ZNF883P0CG24 379 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 GIMD1P0DJR0 217 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ERGP11308 486 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 GRK2P25098 689 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ALDH3A1P30838 453 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 SERPINB5P36952 375 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 NBL1P41271 181 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 FASLGP48023 281 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 HERVK_113P63132 956 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 UBE2IP63279 158 aaKnown RBP7.77□□□□□ -1.17
COPS3-215ENST00000578317 IRX4P78413 519 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 C1orf61Q13536 156 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 GRB7Q14451 532 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 PCLAFQ15004 111 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 POU4F3Q15319 338 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 PCBP2Q15366 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
COPS3-215ENST00000578317 CYP2A13Q16696 494 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.77□□□□□ -1.17
COPS3-215ENST00000578317 PRAMEF14Q5SWL7 426 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 LIPMQ5VYY2 423 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 DBX2Q6ZNG2 339 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 FRA10AC1Q70Z53 315 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 C10orf107Q8IVU9 208 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 KLHDC8AQ8IYD2 350 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 NAGSQ8N159 534 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 FBXO39Q8N4B4 442 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 CFAP61Q8NHU2 1237 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 HMGCLL1Q8TB92 370 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 CKAP2Q8WWK9 683 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 FBXL8Q96CD0 374 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 L3HYPDHQ96EM0 354 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 MENTQ9BUN1 341 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms