RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 OSBPL9Q96SU4 736 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 HGH1Q9BTY7 390 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 AKIRIN1Q9H9L7 192 aaPredicted RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 FANCEQ9HB96 536 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 MRM3Q9HC36 420 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 LHX9Q9NQ69 397 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 GEMIN8Q9NWZ8 242 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 SYBUQ9NX95 663 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 TRMT1Q9NXH9 659 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 ACTR10Q9NZ32 417 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 MARCH4Q9P2E8 410 aaPredicted RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 SERTAD3Q9UJW9 196 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 CROTQ9UKG9 612 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 ICKQ9UPZ9 632 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 CDYLQ9Y232 598 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 MRPS18BQ9Y676 258 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 SDR42E2A6NKP2 422 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ISM1B1AKI9 464 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 C21orf140B9A014 251 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 GOLGA8KD6RF30 607 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 GOLGA8TH3BQL2 631 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PGRMC1O00264 195 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 PFDN6O15212 129 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 SLCO2B1O94956 709 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 RPN2P04844 631 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 KLK3P07288 261 aaPredicted RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 CHRM5P08912 532 aaPredicted RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 MLNP12872 115 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PVRP15151 417 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PAMP19021 973 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 RPS3P23396 243 aaKnown RBP eCLIP7.18□□□□□ -1.26
NUP88-205ENST00000572809 AOAHP28039 575 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 FMO4P31512 558 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 MAGEA6P43360 314 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CDC20Q12834 499 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ERV3-1Q14264 604 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CYP1B1Q16678 543 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 KYNUQ16719 465 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 DEFB109BQ30KR1 87 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 DNAJC21Q5F1R6 531 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 ANKRD22Q5VYY1 191 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ARMC3Q5W041 872 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 MRNIPQ6NTE8 343 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CASC4Q6P4E1 433 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 TTC23LQ6PF05 361 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 SPESP1Q6UW49 350 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CAND1Q86VP6 1230 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 LRRC6Q86X45 466 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 VRK3Q8IV63 474 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 SLC22A15Q8IZD6 547 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 MPP5Q8N3R9 675 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 OTUD6BQ8N6M0 293 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 MCUQ8NE86 351 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 GSDMBQ8TAX9 411 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ACTRT1Q8TDG2 376 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 COG1Q8WTW3 980 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CT55Q8WUE5 264 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 APOBEC4Q8WW27 367 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 CPT1BQ92523 772 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ANP32BQ92688 251 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 ANAPC16Q96DE5 110 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 CLIP3Q96DZ5 547 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 OR2A14Q96R47 310 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 GPR87Q9BY21 358 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PITPNM3Q9BZ71 974 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 KLHL25Q9H0H3 589 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 SLC25A18Q9H1K4 315 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 P2RY12Q9H244 342 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 ADNPQ9H2P0 1102 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 OR6C2Q9NZP2 312 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 GNPTGQ9UJJ9 305 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PLAGL1Q9UM63 463 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 FARSAQ9Y285 508 aaKnown RBP7.18□□□□□ -1.26
NUP88-205ENST00000572809 NEU2Q9Y3R4 380 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PCDHGA6Q9Y5G7 932 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 PIKFYVEQ9Y2I7 2098 aa7.18□□□□□ -1.26
NUP88-205ENST00000572809 FAM237BA0A1B0GVD1 139 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 TMEM150CB9EJG8 249 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 GOLGA8MH3BSY2 632 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 CES2O00748 559 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 ZNF185O15231 689 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 PHF2O75151 1096 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 CREG1O75629 220 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 MSL3P1P0C860 447 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 PLA2G2AP14555 144 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 UGT2B7P16662 529 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 CHRM3P20309 590 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 CD9P21926 228 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 NOS3P29474 1203 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 OAS2P29728 719 aaKnown RBP7.17□□□□□ -1.26
NUP88-205ENST00000572809 EIF3BP55884 814 aaKnown RBP7.17□□□□□ -1.26
NUP88-205ENST00000572809 POLE2P56282 527 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 RPS15P62841 145 aaKnown RBP7.17□□□□□ -1.26
NUP88-205ENST00000572809 NFATC3Q12968 1075 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 KCNAB2Q13303 367 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 DNASE1L3Q13609 305 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 KIR2DS3Q14952 304 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 TMED2Q15363 201 aa7.17□□□□□ -1.26
NUP88-205ENST00000572809 SLC5A12Q1EHB4 618 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms