RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 USP1O94782 785 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 AGFG2O95081 481 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CCNDBP1O95273 360 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 SYF2O95926 243 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ALBP02768 609 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MLNP12872 115 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MCM3P25205 808 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ITGA3P26006 1051 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 PSMB5P28074 263 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ATP5DP30049 168 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 HSD17B2P37059 387 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 COILP38432 576 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ADARP55265 1226 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CCZ1BP86790 482 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CCZ1P86791 482 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 OCA2Q04671 838 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 KCNJ11Q14654 390 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MYBPC3Q14896 1274 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 INPP5JQ15735 1006 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 RBBP7Q16576 425 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 TYSND1Q2T9J0 566 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 KLHL38Q2WGJ6 581 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CCSMST1Q4G0I0 132 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 FHL5Q5TD97 284 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 VWA5B1Q5TIE3 1220 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF470Q6ECI4 717 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CCDC137Q6PK04 289 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 OVCH1Q7RTY7 1134 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 IQCKQ8N0W5 287 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ZADH2Q8N4Q0 377 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 METTL27Q8N6F8 245 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 GALNT11Q8NCW6 608 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 OR2L3Q8NG85 312 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 OR9A1PQ8NGU1 263 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 GABPB2Q8TAK5 448 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 HMGCLL1Q8TB92 370 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CALML6Q8TD86 181 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 GRK7Q8WTQ7 553 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 SMPDL3AQ92484 453 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 PNPLA2Q96AD5 504 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 FKBP10Q96AY3 582 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 CABS1Q96KC9 395 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 BIRC8Q96P09 236 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 SMAD5Q99717 465 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MENTQ9BUN1 341 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ILKAPQ9H0C8 392 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 MRPS30Q9NP92 439 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 INTS10Q9NVR2 710 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 NXT1Q9UKK6 140 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM237BA0A1B0GVD1 139 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 AGPSO00116 658 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 PGRMC1O00264 195 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 DYNC1I1O14576 645 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 PRPF4O43172 522 aaKnown RBP eCLIP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ZSCAN12O43309 604 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ZBTB14O43829 449 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 PRICKLE3O43900 615 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 UQCRHP07919 91 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 GNLYP22749 145 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MMP11P24347 488 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ARNTP27540 789 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 OR1D4P47884 311 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 CARSP49589 748 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 AIMP2Q13155 320 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 PPP1R7Q15435 360 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 KCTD19Q17RG1 926 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MUM1Q2TAK8 710 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 TUBB8Q3ZCM7 444 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ACSBG2Q5FVE4 666 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 THEMIS2Q5TEJ8 643 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 SLC6A19Q695T7 634 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 SUSD1Q6UWL2 747 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 SHISA6Q6ZSJ9 500 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 PPP1R32Q7Z5V6 425 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ADCK2Q7Z695 626 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 CILP2Q8IUL8 1156 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 LMNTD2Q8IXW0 634 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 RASGEF1CQ8N431 466 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MCUQ8NE86 351 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 OR2A1Q8NGT9 310 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 RERGQ96A58 199 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 NACC2Q96BF6 587 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MS4A14Q96JA4 679 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 DPH7Q9BTV6 452 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 SOX17Q9H6I2 414 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 WDR54Q9H977 334 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF304Q9HCX3 659 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 FBXO6Q9NRD1 293 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 C20orf96Q9NUD7 363 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 CDC14AQ9UNH5 594 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MAP4K5Q9Y4K4 846 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 COMMD10Q9Y6G5 202 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 MAU2Q9Y6X3 613 aa8.55□□□□□ -1.04
NPLOC4-204ENST00000570324 CCDC88CQ9P219 2028 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 SNRNP200O75643 2136 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms