RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SOX17Q9H6I2 414 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-215ENST00000569020 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 ENAMQ9NRM1 1142 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 SEMA3GQ9NS98 782 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 FAM169AQ9Y6X4 670 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 WIPF3A6NGB9 483 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 PRICKLE3O43900 615 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 ALOX12BO75342 701 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 C1orf105O95561 183 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 LDLRP01130 860 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 RPS3P23396 243 aaKnown RBP eCLIP13.07□□□□□ -0.323e-8■□□□□ 9.6
CNOT1-215ENST00000569020 CCNFP41002 786 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 BDKRB1P46663 353 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 OR1D4P47884 311 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 VSX2P58304 361 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 OCA2Q04671 838 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 NAA25Q14CX7 972 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 HIF1AQ16665 826 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 WASHC2DQ5SRD0 308 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 KIRREL2Q6UWL6 708 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 C4orf22Q6V702 233 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 SHISA6Q6ZSJ9 500 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 PARP9Q8IXQ6 854 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 METTL27Q8N6F8 245 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 SPC24Q8NBT2 197 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 DNAJB14Q8TBM8 379 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF285Q96NJ3 590 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 MIPEPQ99797 713 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 TSGA10Q9BZW7 698 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 IL22Q9GZX6 179 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 LHPPQ9H008 270 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 BFARQ9NZS9 450 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 MARCH4Q9P2E8 410 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 CTSFQ9UBX1 484 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 GUCA1BQ9UMX6 200 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 NOVA2Q9UNW9 492 aaKnown RBP13.07□□□□□ -0.32
CNOT1-215ENST00000569020 NFS1Q9Y697 457 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 MAU2Q9Y6X3 613 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 NBPF19A0A087WUL8 3843 aa13.07□□□□□ -0.32
CNOT1-215ENST00000569020 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 HYKKA2RU49 373 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 PFDN6O15212 129 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CTSVO60911 334 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 PSMB5P28074 263 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 NMBRP28336 390 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 NPY2RP49146 381 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 EIF3BP55884 814 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CRADDP78560 199 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CCNG2Q16589 344 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 PRMT9Q6P2P2 845 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CNSTQ6PJW8 725 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 IGFL2Q6UWQ7 119 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 SDCCAG8Q86SQ7 713 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 ST6GALNAC3Q8NDV1 305 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 OR2L3Q8NG85 312 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 HMGCLL1Q8TB92 370 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 THOC3Q96J01 351 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 BARD1Q99728 777 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CRB3Q9BUF7 120 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF282Q9UDV7 671 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 NTNG1Q9Y2I2 539 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
CNOT1-215ENST00000569020 SPTBN1Q01082 2364 aaKnown RBP13.06□□□□□ -0.32
CNOT1-215ENST00000569020 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 VSTM2BA6NLU5 285 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 CLDN1O95832 211 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 EIF2S1P05198 315 aaKnown RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 CMPK1P30085 196 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 TSFMP43897 325 aaKnown RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 KLC1Q07866 573 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 CDC16Q13042 620 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 ZNF169Q14929 603 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-215ENST00000569020 RPS6KA1Q15418 735 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 MUM1Q2TAK8 710 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 CCSMST1Q4G0I0 132 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 FRMPD2BQ6IN97 320 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 MRNIPQ6NTE8 343 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 RNF44Q7L0R7 432 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 GSTA5Q7RTV2 222 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 KCNMB4Q86W47 210 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 OR11G2Q8NGC1 345 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 OR2A1Q8NGT9 310 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 STT3BQ8TCJ2 826 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 MIEF2Q96C03 454 aa13.05□□□□□ -0.32
CNOT1-215ENST00000569020 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms