RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	MOXD1	Q6UVY6	613 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	ATP6V1E2	Q96A05	226 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	FAM162A	Q96A26	154 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	SENP5	Q96HI0	755 aa	Predicted RBP	4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	JAKMIP1	Q96N16	626 aa	Known RBP	4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	UHRF2	Q96PU4	802 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	CCDC3	Q9BQI4	270 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442		Q9H8V8	135 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	DNAJB9	Q9UBS3	223 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	TRIM17	Q9Y577	477 aa		4.06	□□□□□ -1.76
CHD9-215	ENST00000565442	KIAA1210	Q9ULL0	1709 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	CASTOR2	A6NHX0	329 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ENO4	A6NNW6	628 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ZNF197	O14709	1029 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ARPC2	O15144	300 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	RPS6KA5	O75582	802 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ZFY	P08048	801 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ADRA2C	P18825	462 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	CEACAM8	P31997	349 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	RPL21	P46778	160 aa	Known RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	MTCP1	P56278	107 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	SCN1B	Q07699	218 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	TUBB2A	Q13885	445 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	TAF13	Q15543	124 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	XKR3	Q5GH77	459 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	LRRC73	Q5JTD7	316 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	LCE1F	Q5T754	118 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	C1QTNF12	Q5T7M4	302 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	SHE	Q5VZ18	495 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	SLC35E4	Q6ICL7	350 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	CEACAM20	Q6UY09	585 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	MARK2	Q7KZI7	788 aa	Known RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	SIX6OS1	Q8N1H7	587 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	RYBP	Q8N488	228 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	OCC1	Q8TAD7	63 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	HEXDC	Q8WVB3	486 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ST6GALNAC6	Q969X2	333 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	HES6	Q96HZ4	224 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	TUBB2B	Q9BVA1	445 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	SNX25	Q9H3E2	840 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	FGF21	Q9NSA1	209 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	ADPRHL2	Q9NX46	363 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	NOL7	Q9UMY1	257 aa	Known RBP	4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	STUB1	Q9UNE7	303 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442	KCNK7	Q9Y2U2	307 aa		4.05	□□□□□ -1.76
CHD9-215	ENST00000565442		A0A1W2PPW3	197 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	SMIM1	B2RUZ4	78 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442		H0Y626	953 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	ATP6V0E1	O15342	81 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	SOCS5	O75159	536 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	ATP6AP2	O75787	350 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	DDHD2	O94830	711 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	SLU7	O95391	586 aa	Known RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	NGF	P01138	241 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	RPN1	P04843	607 aa	Known RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	UMOD	P07911	640 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	HSP90AB1	P08238	724 aa	Known RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	VIM	P08670	466 aa	Known RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	IGHV4-31	P0DP07	118 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	HSD17B3	P37058	310 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	WNT5A	P41221	380 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	TNNT3	P45378	269 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	RGS7	P49802	495 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	NAGLU	P54802	743 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	PTEN	P60484	403 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	GCNT1	Q02742	428 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	PTK6	Q13882	451 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	SQLE	Q14534	574 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	NONO	Q15233	471 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	UGCG	Q16739	394 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	PHKG1	Q16816	387 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	CTU2	Q2VPK5	515 aa	Known RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	DCUN1D3	Q8IWE4	304 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	RASGEF1A	Q8N9B8	481 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	OR10V1	Q8NGI7	309 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	OR52N5	Q8NH56	324 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	MR1	Q95460	341 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	ZNF524	Q96C55	264 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	CCDC114	Q96M63	670 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	INPP5K	Q9BT40	448 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	OR2B2	Q9GZK3	357 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	TLE6	Q9H808	572 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	SIX2	Q9NPC8	291 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	P4HTM	Q9NXG6	502 aa		4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD9-215	ENST00000565442	OBSCN	Q5VST9	7968 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	C2orf81	A6NN90	581 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	PMS2P5	A8MQ11	134 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	SNX3	O60493	162 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	TGDS	O95455	350 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	MYL6B	P14649	208 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	DARS	P14868	501 aa	Known RBP	4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	LBP	P18428	481 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	CA6	P23280	308 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	CSTF2	P33240	577 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	TIMP3	P35625	211 aa		4.03	□□□□□ -1.76
CHD9-215	ENST00000565442	NKX2-1	P43699	371 aa	Predicted RBP	4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms