RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 RGS16O15492 202 aaPredicted RBP12.03□□□□□ -0.48
KARS-204ENST00000564578 KLK8O60259 260 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 PRAMEF10O60809 474 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 CSO75390 466 aaKnown RBP12.03□□□□□ -0.48
KARS-204ENST00000564578 SASH3O75995 380 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 GSTA1P08263 222 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 RBP1P09455 135 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 PVRP15151 417 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 CRHR1P34998 444 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 GGT5P36269 586 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 GDF5P43026 501 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 HNMTP50135 292 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 TARDBPQ13148 414 aaKnown RBP eCLIP12.03□□□□□ -0.48
KARS-204ENST00000564578 C16orf72Q14CZ0 275 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 PTCHD3Q3KNS1 767 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 CDKL4Q5MAI5 379 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 SNAP47Q5SQN1 464 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 ARMC6Q6NXE6 501 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 HDXQ7Z353 690 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 DGLUCYQ7Z3D6 616 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 EXT2Q93063 718 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 ESAMQ96AP7 390 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 MRPL57Q9BQC6 102 aaKnown RBP12.03□□□□□ -0.48
KARS-204ENST00000564578 TMEM79Q9BSE2 394 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 MRPL46Q9H2W6 279 aaKnown RBP12.03□□□□□ -0.48
KARS-204ENST00000564578 PCM1Q15154 2024 aa12.03□□□□□ -0.48
KARS-204ENST00000564578 IGKV1-8A0A0C4DH67 115 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 TLCD2A6NGC4 264 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 TOX3O15405 576 aaPredicted RBP12.02□□□□□ -0.49
KARS-204ENST00000564578 HYAL3O43820 417 aaPredicted RBP12.02□□□□□ -0.49
KARS-204ENST00000564578 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 JUPP14923 745 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 ST6GAL1P15907 406 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 NPPBP16860 134 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 OAS2P29728 719 aaKnown RBP12.02□□□□□ -0.49
KARS-204ENST00000564578 SLC6A12P48065 614 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 INHBCP55103 352 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 SF1Q15637 639 aaKnown RBP12.02□□□□□ -0.49
KARS-204ENST00000564578 PHF19Q5T6S3 580 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 KIAA1614Q5VZ46 1190 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 OR2L3Q8NG85 312 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 ATL1Q8WXF7 558 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 KLHL6Q8WZ60 621 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 SLC22A18Q96BI1 424 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 CD180Q99467 661 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 MIPEPQ99797 713 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 EGFL8Q99944 293 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 KLHL25Q9H0H3 589 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 CENPHQ9H3R5 247 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 C1GALT1Q9NS00 363 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 MKS1Q9NXB0 559 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 CD274Q9NZQ7 290 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 TAC3Q9UHF0 121 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 SH2B3Q9UQQ2 575 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 KLHL20Q9Y2M5 609 aa12.02□□□□□ -0.49
KARS-204ENST00000564578 ZNF839A8K0R7 811 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SYCE1LA8MT33 242 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 AGRPO00253 132 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TYROBPO43914 113 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 GLRA3O75311 464 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 RASSF9O75901 435 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CCT5P48643 541 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 AGTR2P50052 363 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 PRDX1Q06830 199 aaKnown RBP12.01□□□□□ -0.49
KARS-204ENST00000564578 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.49
KARS-204ENST00000564578 ZIC1Q15915 447 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SLC5A12Q1EHB4 618 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CACHD1Q5VU97 1274 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SULT1C3Q6IMI6 304 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CROCCP2Q86T23 111 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 MED8Q96G25 268 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SLC41A2Q96JW4 573 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SCYL1Q96KG9 808 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TMEM74Q96NL1 305 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 DEPDC7Q96QD5 511 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 ZNF768Q9H5H4 540 aaKnown RBP12.01□□□□□ -0.49
KARS-204ENST00000564578 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TMBIM4Q9HC24 238 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CCDC177Q9NQR7 707 aaPredicted RBP12.01□□□□□ -0.49
KARS-204ENST00000564578 NUDT4Q9NZJ9 180 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 GRID1Q9ULK0 1009 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SLC22A14Q9Y267 594 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 PCDHB11Q9Y5F2 797 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 PMS2P1A4D2B8 440 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 PABPN1LA6NDY0 278 aaKnown RBP12.01□□□□□ -0.49
KARS-204ENST00000564578 SLC9B1P1A6NJY1 282 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SUPT3HB4E1H0 165 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 COPEO14579 308 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 NRP2O60462 931 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SPAG7O75391 227 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SUPT3HO75486 399 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 PROCP04070 461 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 MYZAPP0CAP1 466 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 MAGP20916 626 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CDH3P22223 829 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms