RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 BLOC1S3Q6QNY0 202 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 NUDT18Q6ZVK8 323 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 MDGA1Q8NFP4 955 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 OR2AP1Q8NGE2 309 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 AP2M1Q96CW1 435 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ZCCHC2Q9C0B9 1178 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 PDP1Q9P0J1 537 aaPredicted RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 AP3M1Q9Y2T2 418 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 DHRS7Q9Y394 339 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 SAGE2PA6NJ88 616 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 CENPBD1B2RD01 187 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 TOR1BO14657 336 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 STX16O14662 325 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 TNFRSF10BO14763 440 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 INPPL1O15357 1258 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 DFNA5O60443 496 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 APOA1P02647 267 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 IL6P05231 212 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ANXA4P09525 319 aaPredicted RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 LRRC66Q68CR7 880 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SLC16A12Q6ZSM3 486 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ARMCX6Q7L4S7 300 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ZDHHC21Q8IVQ6 265 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 CFAP206Q8IYR0 622 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 TMEM199Q8N511 208 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 OR6Q1Q8NGQ2 317 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SH3RF2Q8TEC5 729 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 TMEM125Q96AQ2 219 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SMURF2Q9HAU4 748 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RAPGEFL1Q9UHV5 662 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SHROOM3Q8TF72 1996 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ANKDD1BA6NHY2 528 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 H3BM21 787 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SEC24AO95486 1093 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 KRT8P05787 483 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ALDOCP09972 364 aaKnown RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 IGFBP5P24593 272 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RFX3P48380 749 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PPP5CP53041 499 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 OR4D2P58180 307 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SEMA3AQ14563 771 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ABRAXAS2Q15018 415 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PTCHD3Q3KNS1 767 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PLA2G4EQ3MJ16 856 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 TRIM60Q495X7 471 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PAGE3Q5JUK9 113 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SERPINA13PQ6UXR4 307 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 CHST9Q7L1S5 443 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PHF10Q8WUB8 498 aaKnown RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 ZNF486Q96H40 463 aaPredicted RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 SLC39A13Q96H72 371 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 NOL6Q9H6R4 1146 aaKnown RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 AMBNQ9NP70 447 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.19□□□□□ -0.78
RNF40-204ENST00000563683 LOC285095A0A1B0GVY8 99 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 FXYD1O00168 92 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 GABARAPO95166 117 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 IFNA14P01570 189 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SLC10A3P09131 477 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 HTR1EP28566 365 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 CD40LGP29965 261 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 ALDH4A1P30038 563 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RCVRNP35243 200 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 NFATC2Q13469 925 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 FAM219BQ5XKK7 198 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 OR4F3Q6IEY1 312 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 PEX13Q92968 403 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 SCAMP4Q969E2 229 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 L3HYPDHQ96EM0 354 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RBM4BQ9BQ04 359 aaKnown RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 RBM4Q9BWF3 364 aaKnown RBP10.19□□□□□ -0.78
RNF40-204ENST00000563683 POPDC3Q9HBV1 291 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RAB23Q9ULC3 237 aa10.19□□□□□ -0.78
RNF40-204ENST00000563683 RGS13O14921 159 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SUV39H1O43463 412 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ALPLP05186 524 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ATXN1LP0C7T5 689 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 IL7RP16871 459 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 LAG3P18627 525 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 CTNNB1P35222 781 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 HNF1BP35680 557 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ERVPABLB-1P60509 514 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 CTF1Q16619 201 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 INO80DQ53TQ3 878 aaPredicted RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DSG4Q86SJ6 1040 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 APCDD1Q8J025 514 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 KRTCAP2Q8N6L1 136 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 IGSF21Q96ID5 467 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 UBXN10Q96LJ8 280 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SGIP1Q9BQI5 828 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SDR39U1Q9NRG7 319 aaPredicted RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 AIG1Q9NVV5 245 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SAMD4AQ9UPU9 718 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 SAP18O00422 153 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 BCKDKO14874 412 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DLGAP3O95886 979 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 BMP4P12644 408 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms