RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMEM182Q6ZP80 229 aaPredicted RBP4.1□□□□□ -1.75
CASC4-206ENST00000558847 DSG4Q86SJ6 1040 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FOXP4Q8IVH2 680 aaPredicted RBP4.1□□□□□ -1.75
CASC4-206ENST00000558847 SIAH3Q8IW03 269 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FAM219AQ8IW50 185 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 MAB21L3Q8N8X9 362 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 DMBX1Q8NFW5 382 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 OR4K1Q8NGD4 311 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 OR1J1Q8NGS3 322 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 UBLCP1Q8WVY7 318 aaPredicted RBP4.1□□□□□ -1.75
CASC4-206ENST00000558847 ZNF583Q96ND8 569 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 PITPNM3Q9BZ71 974 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 ZMYND12Q9H0C1 365 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 MINDY3Q9H8M7 445 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 Q9H8V8 135 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 TMEM161AQ9NX61 479 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FLRT3Q9NZU0 649 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 CACNG4Q9UBN1 327 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 FBXL5Q9UKA1 691 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 SNX5Q9Y5X3 404 aa4.1□□□□□ -1.75
CASC4-206ENST00000558847 TRIM64A6NGJ6 449 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 TRIM64BA6NI03 449 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 C2orf81A6NN90 581 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 KBTBD13C9JR72 458 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 FLRT2O43155 660 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 PPIP5K2O43314 1243 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 SLC28A2O43868 658 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 XPNPEP2O43895 674 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 PRKNO60260 465 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 ATP6AP2O75787 350 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 GOSR1O95249 250 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 C8orf89P0DMQ9 161 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 TGFB3P10600 412 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 TCF4P15884 667 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 EFNA1P20827 205 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 FRKP42685 505 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 IER3P46695 156 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 PDLIM4P50479 330 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 ZNF132P52740 706 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 CLDN15P56746 228 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 ST8SIA6P61647 398 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 CACNG1Q06432 222 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 TAZQ16635 292 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 PDLIM3Q53GG5 364 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 LACTB2Q53H82 288 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 STXBP5Q5T5C0 1151 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 OR4A47Q6IF82 309 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 FOXL2NBQ6ZUU3 175 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 ARMC9Q7Z3E5 817 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 SLC9B2Q86UD5 537 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 CDK20Q8IZL9 346 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 LGI2Q8N0V4 545 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 BMPERQ8N8U9 685 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 PHLDA1Q8WV24 401 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 HSD17B8Q92506 261 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 RIT1Q92963 219 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 P2RX5Q93086 422 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 ST6GALNAC6Q969X2 333 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 EXOC4Q96A65 974 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 SLC47A1Q96FL8 570 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 FAM71F1Q96KD3 344 aaPredicted RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 URM1Q9BTM9 101 aaKnown RBP4.09□□□□□ -1.75
CASC4-206ENST00000558847 DNAJC4Q9NNZ3 241 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 SLCO1C1Q9NYB5 712 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 SEPT10Q9P0V9 454 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 WDR83OSQ9Y284 106 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 ITM2BQ9Y287 266 aa4.09□□□□□ -1.75
CASC4-206ENST00000558847 C13orf42A0A1B0GVH6 325 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CASTOR2A6NHX0 329 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 PRAC2D3DTV9 90 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 RTN2O75298 545 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CRCPO75575 148 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 PNPP00491 289 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 NR3C1P04150 777 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 ATP1A1P05023 1023 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 ITIH1P19827 911 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 HLA-DPA1P20036 260 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 MSH3P20585 1137 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CDH3P22223 829 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 EPHA2P29317 976 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 NPBWR1P48145 328 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 RGS19P49795 217 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 KHKP50053 298 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 VAMP7P51809 220 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 MAZP56270 477 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 PTENP60484 403 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 ARF5P84085 180 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 DMPKQ09013 629 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 RCN2Q14257 317 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CTU2Q2VPK5 515 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 ITPRIPL2Q3MIP1 535 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 CCDC158Q5M9N0 1113 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 WBP2NLQ6ICG8 309 aa4.08□□□□□ -1.76
CASC4-206ENST00000558847 RBM23Q86U06 439 aaKnown RBP4.08□□□□□ -1.76
CASC4-206ENST00000558847 TMEM139Q8IV31 216 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms