RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ARNT2Q9HBZ2 717 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 STMN3Q9NZ72 180 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 ZNF282Q9UDV7 671 aaPredicted RBP11.94□□□□□ -0.5
PSEN1-221ENST00000557293 CIDEBQ9UHD4 219 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 LCMT1Q9UIC8 334 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 TRHDEQ9UKU6 1024 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 ACANP16112 2415 aa11.94□□□□□ -0.5
PSEN1-221ENST00000557293 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 IDSB3KWA1 339 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 SRPX2O60687 465 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 CRTAMO95727 393 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 CD9P21926 228 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 RAB28P51157 221 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 OCA2Q04671 838 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 LONRF1Q17RB8 773 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 KRTCAP3Q53RY4 240 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 ZNF766Q5HY98 468 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 CLEC17AQ6ZS10 378 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 TAS2R42Q7RTR8 314 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 FGD2Q7Z6J4 655 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 VRK3Q8IV63 474 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 SIAH3Q8IW03 269 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 PHF10Q8WUB8 498 aaKnown RBP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 ELMO1Q92556 727 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 NRGNQ92686 78 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 CDKN2AIPNLQ96HQ2 116 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 C10orf90Q96M02 699 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 QKIQ96PU8 341 aaKnown RBP eCLIP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 SELENOSQ9BQE4 189 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 HES7Q9BYE0 225 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 ZNF700Q9H0M5 742 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 GBA3Q9H227 469 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 CXXC4Q9H2H0 198 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 GSX1Q9H4S2 264 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 SYNPO2LQ9H987 977 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 GPAMQ9HCL2 828 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 SMARCAL1Q9NZC9 954 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 ZC3H7BQ9UGR2 993 aaKnown RBP11.93□□□□□ -0.5
PSEN1-221ENST00000557293 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 PCDHGB6Q9Y5F9 930 aa11.93□□□□□ -0.5
PSEN1-221ENST00000557293 TARM1B6A8C7 271 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 FFAR3O14843 346 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 GPR42O15529 346 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 ANXA9O76027 345 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 S1PR4O95977 384 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TMEM253P0C7T8 217 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 PSMA3P25788 255 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 RBL1P28749 1068 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 IST1P53990 364 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 YBX1P67809 324 aaKnown RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TYRO3Q06418 890 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TFDP2Q14188 446 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 SPARCL1Q14515 664 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 PRTGQ2VWP7 1150 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 KAZNQ674X7 775 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 PRMT9Q6P2P2 845 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TMEM205Q6UW68 189 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TGIF2LYQ8IUE0 185 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 KLHDC8BQ8IXV7 354 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 OR2L8Q8NGY9 312 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 CTNNBL1Q8WYA6 563 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 ZUFSPQ96AP4 578 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 SIGLEC12Q96PQ1 595 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 TSPAN10Q9H1Z9 355 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 RIC8BQ9NVN3 520 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 NLE1Q9NVX2 485 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 DDX56Q9NY93 547 aaKnown RBP11.92□□□□□ -0.5
PSEN1-221ENST00000557293 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 HRH3Q9Y5N1 445 aa11.92□□□□□ -0.5
PSEN1-221ENST00000557293 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 E9PLN8 166 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 FANCGO15287 622 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 ASNA1O43681 348 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 TNNT1P13805 278 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 PSMB4P28070 264 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 ST13P50502 369 aaKnown RBP11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SF1Q15637 639 aaKnown RBP11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SLC18A3Q16572 532 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 ABHD17BQ5VST6 288 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 TAX1BP1Q86VP1 789 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 TMTC1Q8IUR5 882 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 AMER3Q8N944 861 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 AGAP11Q8TF27 550 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 P3H4Q92791 437 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SLC22A18Q96BI1 424 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
PSEN1-221ENST00000557293 NPAS2Q99743 824 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms