RNA–Protein interactions for RNA: ENST00000557140.5

NFKBIA-208, Transcript of NFKB inhibitor alpha, human

TSL 5 BASIC

Gene NFKBIA, Length 1,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKBIA-208	ENST00000557140	LMNTD1	Q8N9Z9	388 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	TTC29	Q8NA56	475 aa	Predicted RBP	11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	LINC01555	Q8NAE3	123 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	OR2L8	Q8NGY9	312 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MAGEC3	Q8TD91	643 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MFSD3	Q96ES6	412 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SH3GL2	Q99962	352 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CHRNA10	Q9GZZ6	450 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	YY1AP1	Q9H869	796 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SLAMF7	Q9NQ25	335 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	TREX1	Q9NSU2	369 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	RUVBL2	Q9Y230	463 aa	Known RBP	11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ANKRD12	Q6UB98	2062 aa		11.63	□□□□□ -0.55
NFKBIA-208	ENST00000557140		H3BMM5	538 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	HCRTR1	O43613	425 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SLCO2B1	O94956	709 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	IGHE	P01854	428 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ALPP	P05187	535 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CAPN1	P07384	714 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PIM1	P11309	404 aa	Predicted RBP	11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	RPS3	P23396	243 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	6e-12	■■□□□ 12.5
NFKBIA-208	ENST00000557140	CCNF	P41002	786 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ARSF	P54793	590 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SSPN	Q14714	243 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KCTD19	Q17RG1	926 aa	Predicted RBP	11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NADK2	Q4G0N4	442 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NKAIN1	Q4KMZ8	207 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	LRRC8B	Q6P9F7	803 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MCAT	Q8IVS2	390 aa	Known RBP	11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	DNAJC22	Q8N4W6	341 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MREG	Q8N565	214 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ZBTB2	Q8N680	514 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FDCSP	Q8NFU4	85 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FLVCR1-AS1	Q8TAF5	88 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CPT1C	Q8TCG5	803 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FER1L6-AS2	Q96M78	137 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GBP5	Q96PP8	586 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SELENOS	Q9BQE4	189 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KIFC1	Q9BW19	673 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MFRP	Q9BY79	579 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CCDC68	Q9H2F9	335 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MRM3	Q9HC36	420 aa	Known RBP	11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	LUZP4	Q9P127	313 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	SOX13	Q9UN79	622 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	VPS9D1	Q9Y2B5	631 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CRYL1	Q9Y2S2	319 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PCDHGB7	Q9Y5F8	929 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NFS1	Q9Y697	457 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FAM169A	Q9Y6X4	670 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PCM1	Q15154	2024 aa		11.62	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NUP210L	Q5VU65	1888 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PRRC2C	Q9Y520	2896 aa	Known RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140		A0A1B0GX78	115 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KRT14	P02533	472 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ERVK-10	P10266	1014 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GRIA3	P42263	894 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	THOC5	Q13769	683 aa	Known RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	UBAP2L	Q14157	1087 aa	Known RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GRM7	Q14831	915 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	TCTE1	Q5JU00	501 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ZNF385C	Q66K41	422 aa	Predicted RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FIGLA	Q6QHK4	219 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	OR2Y1	Q8NGV0	311 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MAGOHB	Q96A72	148 aa	Known RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MIB2	Q96AX9	1013 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NAP1L3	Q99457	506 aa	Predicted RBP	11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MIPEP	Q99797	713 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NUDT9	Q9BW91	350 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	P2RY12	Q9H244	342 aa		11.61	□□□□□ -0.55
NFKBIA-208	ENST00000557140	TCRBV7S3A2	A0A539	114 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GOLGA8M	H3BSY2	632 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	EBAG9	O00559	213 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NIPSNAP2	O75323	286 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	AVIL	O75366	819 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KLF7	O75840	302 aa	Predicted RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	FKBP9	O95302	570 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	C1orf105	O95561	183 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ESR1	P03372	595 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CTSB	P07858	339 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PSMB5	P28074	263 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GABRA4	P48169	554 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	VSX2	P58304	361 aa	Predicted RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	DHX34	Q14147	1143 aa	Known RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	NAA25	Q14CX7	972 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CTSL3P	Q5NE16	218 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	IRAK1BP1	Q5VVH5	260 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ZNF470	Q6ECI4	717 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	HPS6	Q86YV9	775 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	METTL27	Q8N6F8	245 aa	Predicted RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PRELID2	Q8N945	189 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	ZNF669	Q96BR6	464 aa	Predicted RBP	11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	PTER	Q96BW5	349 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	TCF12	Q99081	682 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	CUTC	Q9NTM9	273 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	P4HTM	Q9NXG6	502 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	MAD1L1	Q9Y6D9	718 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	GOLGA6L10	A0A0M3HER8	536 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	KRT87P	A6NCN2	255 aa		11.6	□□□□□ -0.55
NFKBIA-208	ENST00000557140	DSCR3	O14972	297 aa		11.6	□□□□□ -0.55

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