RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SPATA31D4Q6ZUB0 917 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 FRG2BQ96QU4 278 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 POLR2J2Q9GZM3 115 aaKnown RBP14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 ILVBLA1L0T0 632 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 PLOD2O00469 737 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 CD97P48960 835 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 CD47Q08722 323 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 ABRAXAS2Q15018 415 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 PIK3R6Q5UE93 754 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 ATG9BQ674R7 924 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 IGFN1Q86VF2 1251 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 CNTN4Q8IWV2 1026 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 UPF1Q92900 1129 aaKnown RBP eCLIP14.67□□□□□ -0.067e-11■■□□□ 11.5
ARHGEF40-207ENST00000556399 PLD4Q96BZ4 506 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 CD244Q9BZW8 370 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 FLRT1Q9NZU1 646 aa14.67□□□□□ -0.06
ARHGEF40-207ENST00000556399 PPP6CO00743 305 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 BCAS1O75363 584 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ERAL1O75616 437 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 RAB25P57735 213 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 TSTQ16762 297 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 HKDC1Q2TB90 917 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 RAET1GQ6H3X3 334 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 KRT74Q7RTS7 529 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 YAF2Q8IY57 180 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ITPKCQ96DU7 683 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 OCEL1Q9H607 264 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ITM2CQ9NQX7 267 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 POFUT2Q9Y2G5 429 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GABRB3P28472 473 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 FUT10Q6P4F1 479 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 TUBA3EQ6PEY2 450 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 DTWD1Q8N5C7 304 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 TIFAQ96CG3 184 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 COL21A1Q96P44 957 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 EHD1Q9H4M9 534 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 MRPL39Q9NYK5 338 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GMPR2Q9P2T1 348 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 PCDHGA11Q9Y5H2 935 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 TRAV19A0A0A6YYK7 116 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 SSNA1O43805 119 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 PRSS56P0CW18 603 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ACLYP53396 1101 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 STX4Q12846 297 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 CLCA4Q14CN2 919 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 DDI2Q5TDH0 399 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 BICRALQ6AI39 1079 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 PIWIL3Q7Z3Z3 882 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 RGL4Q8IZJ4 473 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GRPEL2Q8TAA5 225 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 XAGE5Q8WWM1 108 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 IGSF8Q969P0 613 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 MRPL48Q96GC5 212 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 IL4I1Q96RQ9 567 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 NAA50Q9GZZ1 169 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 PCTPQ9UKL6 214 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 MKLN1Q9UL63 735 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 SLC22A14Q9Y267 594 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ANKRD12Q6UB98 2062 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 IRGMA1A4Y4 181 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 H3BM21 787 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ASGR1P07306 291 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 SCARB2Q14108 478 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GNA13Q14344 377 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GPR33Q49SQ1 333 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 C17orf50Q8WW18 174 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 FAIM2Q9BWQ8 316 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 NECTIN3Q9NQS3 549 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 GKN1Q9NS71 199 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 TREX1Q9NSU2 369 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 SPACA6W5XKT8 324 aa14.66□□□□□ -0.06
ARHGEF40-207ENST00000556399 ALDOCP09972 364 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 GPR1P46091 355 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 RPS3AP61247 264 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 CHRNA6Q15825 494 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 C11orf88Q6PI97 169 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 KHSRPQ92945 711 aaKnown RBP eCLIP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 FUBP1Q96AE4 644 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 MIR1-1HGQ9H1L0 117 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 TPT1P8Q9HAU6 139 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 ASF1AQ9Y294 204 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 PQBP1O60828 265 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 ATG13O75143 517 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 ITGB1P05556 798 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 UPP1Q16831 310 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 BHLHB9Q6PI77 547 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 OR52L1Q8NGH7 329 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 GFM1Q96RP9 751 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 KCNH6Q9H252 994 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 RPS6KB2Q9UBS0 482 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 DHRS7Q9Y394 339 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 PCDH8O95206 1070 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 CENPAP49450 140 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 TAS2R41P59536 307 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 NCS1P62166 190 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 PON2Q15165 354 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZNF517Q6ZMY9 492 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 LRRC70Q7Z2Q7 622 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms