RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 TFAP2BQ92481 460 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 KIAA1143Q96AT1 154 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 MED31Q9Y3C7 131 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 HYKKA2RU49 373 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 HAS3O00219 553 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 PLOD3O60568 738 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF20P17024 532 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TSPAN8P19075 237 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 CDH12P55289 794 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SELENOVP59797 346 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SCARB2Q14108 478 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SEC23BQ15437 767 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 DUOXA1Q1HG43 343 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 STX12Q86Y82 276 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 FAM86B1Q8N7N1 296 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ZSCAN4Q8NAM6 433 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 BMFQ96LC9 184 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 GPR22Q99680 433 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 IFT27Q9BW83 186 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ASPNQ9BXN1 380 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ARHGAP39Q9C0H5 1083 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TRMT13Q9NUP7 481 aaKnown RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 MED11Q9P086 117 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 EIF2B4Q9UI10 523 aaKnown RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 FBXW2Q9UKT8 454 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TELO2Q9Y4R8 837 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SCDO00767 359 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 DCLK1O15075 740 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 HLA-DPB1P04440 258 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 EPCAMP16422 314 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 CHRNB2P17787 502 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 OR3A3P47888 321 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 OR3A2P47893 321 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TSPAN5P62079 268 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 FAM174BQ3ZCQ3 159 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF440Q8IYI8 595 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 OR6K2Q8NGY2 324 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 KIAA1191Q96A73 305 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 DPYSL5Q9BPU6 564 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 MECRQ9BV79 373 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF358Q9NW07 568 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 NLGN3Q9NZ94 848 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 LIPT1Q9Y234 373 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 FCF1Q9Y324 198 aaKnown RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TSPAN6O43657 245 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF623O75123 536 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 C9P02748 559 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 H1F0P07305 194 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 FPR1P21462 350 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 F8A1P23610 371 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 OXTRP30559 389 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CSKP41240 450 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 EMX2Q04743 252 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 RAPSNQ13702 412 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ENPP2Q13822 863 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 SF3B4Q15427 424 aaKnown RBP eCLIP10.47□□□□□ -0.735e-6■■■■□ 26.7
ACTN1-216ENST00000556083 ZFP69Q49AA0 526 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 PYHIN1Q6K0P9 492 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 PIGWQ7Z7B1 504 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 COPS4Q9BT78 406 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TRIM39Q9HCM9 518 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ERVK-5Q9HDB9 667 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 DGKBQ9Y6T7 804 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF99A8MXY4 864 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 NUAK1O60285 661 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 AOC2O75106 756 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ZMPSTE24O75844 475 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 BCAS2O75934 225 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 IFNA21P01568 189 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 OR4Q2P0C623 313 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ATF6P18850 670 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 RPL10P27635 214 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 NFKB2Q00653 900 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 KCNC4Q03721 635 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 SLC10A7Q0GE19 358 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 GAS6Q14393 721 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 NANOGNBQ7Z5D8 188 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 GPR65Q8IYL9 337 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 CBR4Q8N4T8 237 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ERMAPQ96PL5 475 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 WRAP53Q9BUR4 548 aaKnown RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 OR2AG1Q9H205 316 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TRIM36Q9NQ86 728 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 STOX2Q9P2F5 926 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-216ENST00000556083 SCML1Q9UN30 329 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ANKRD66B4E2M5 251 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
ACTN1-216ENST00000556083 TP53I11O14683 189 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms