RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 MAP7Q14244 749 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 IL11RAQ14626 422 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 FAM83EQ2M2I3 478 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 TSNAXIP1Q2TAA8 658 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 LRRC8EQ6NSJ5 796 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 KLC3Q6P597 504 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CYB5D1Q6P9G0 228 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CEP97Q8IW35 865 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CACNA2D3Q8IZS8 1091 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 NKAPQ8N5F7 415 aaKnown RBP9.33□□□□□ -0.92
ACTN1-215ENST00000555616 ARFGAP2Q8N6H7 521 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 FAM76AQ8TAV0 307 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CD200R1Q8TD46 325 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 ELMO1Q92556 727 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 FAM136AQ96C01 138 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 KCNK9Q9NPC2 374 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 HRASLS2Q9NWW9 162 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 MKS1Q9NXB0 559 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 DCDC2Q9UHG0 476 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 POMT2Q9UKY4 750 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 DHRS7Q9Y394 339 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SDK2Q58EX2 2172 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SLC5A10A0PJK1 596 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 IQCF5A8MTL0 148 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 FOXO6A8MYZ6 492 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 EIF3FO00303 357 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ITGB2P05107 769 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 CCDC166P0CW27 439 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ENO3P13929 434 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 LIFP15018 202 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ITGB6P18564 788 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 NR1D1P20393 614 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 MAP4P27816 1152 aaKnown RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ACADLP28330 430 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 CRHR1P34998 444 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 STAT5AP42229 794 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 CSRP3P50461 194 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 PLOD1Q02809 727 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 FOXM1Q08050 763 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TUBB3Q13509 450 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 KRT33BQ14525 404 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ZNF460Q14592 562 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 PLEKHS1Q5SXH7 462 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 KIAA1614Q5VZ46 1190 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 PAQR3Q6TCH7 311 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TIPARPQ7Z3E1 657 aaKnown RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 NLGN4XQ8N0W4 816 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 IL22RA1Q8N6P7 574 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 BANPQ8N9N5 519 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 SIDT2Q8NBJ9 832 aaKnown RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 NLGN4YQ8NFZ3 816 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 OR52E1Q8NGJ3 308 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 LCN9Q8WX39 176 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 SLC39A7Q92504 469 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TFGQ92734 400 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 OR6C1Q96RD1 312 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 MAP3K3Q99759 626 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 SELENOSQ9BQE4 189 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 HGH1Q9BTY7 390 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ULBP3Q9BZM4 244 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TWSG1Q9GZX9 223 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TRIT1Q9H3H1 467 aaKnown RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 SRMSQ9H3Y6 488 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TFB2MQ9H5Q4 396 aaKnown RBP9.32□□□□□ -0.92
ACTN1-215ENST00000555616 NMRAL1Q9HBL8 299 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 NKIRAS1Q9NYS0 192 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 GRID1Q9ULK0 1009 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 MED16Q9Y2X0 877 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 ZNF462Q96JM2 2506 aa9.32□□□□□ -0.92
ACTN1-215ENST00000555616 TMEM120BA0PK00 339 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 CCDC189A1A4V9 331 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 TM9SF1O15321 606 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 PRPF4O43172 522 aaKnown RBP eCLIP9.31□□□□□ -0.929e-7■■■□□ 15.8
ACTN1-215ENST00000555616 SPAG7O75391 227 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 C1QL1O75973 258 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 KLHL2O95198 593 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 ZWINTO95229 277 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 ZBTB11O95625 1053 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-215ENST00000555616 LTA4HP09960 611 aaKnown RBP9.31□□□□□ -0.92
ACTN1-215ENST00000555616 FOLR1P15328 257 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 AOAHP28039 575 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 CCR7P32248 378 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 SLC18A1P54219 525 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 ATP6V0D1P61421 351 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 PPP2R2AP63151 447 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 HSD11B2P80365 405 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 TIAL1Q01085 375 aaKnown RBP eCLIP9.31□□□□□ -0.924e-6■■■□□ 18.3
ACTN1-215ENST00000555616 ACY1Q03154 408 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-215ENST00000555616 ABHD18Q0P651 414 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 HSPA14Q0VDF9 509 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 PRKAA1Q13131 559 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 ARMC6Q6NXE6 501 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 SH2D5Q6ZV89 423 aa9.31□□□□□ -0.92
ACTN1-215ENST00000555616 CPNE9Q8IYJ1 553 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms