RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NEURL2Q9BR09 285 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TEX13AQ9BXU3 409 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SEMA6AQ9H2E6 1030 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 C6orf106Q9H6K1 298 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF556Q9HAH1 456 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BCCIPQ9P287 314 aaKnown RBP eCLIP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KLHL9Q9P2J3 617 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CRNNQ9UBG3 495 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE2DQ9UEU5 116 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ANAPC2Q9UJX6 822 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 POU2F3Q9UKI9 436 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 WBP11Q9Y2W2 641 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 OR2W1Q9Y3N9 320 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CEMIPQ8WUJ3 1361 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GVINP1Q7Z2Y8 2422 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CEP250Q9BV73 2442 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CHD6Q8TD26 2715 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 MCM3APO60318 1980 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DOCK1Q14185 1865 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 COL4A6Q14031 1691 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IGHV4OR15-8A0A075B7B6 117 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZCWPW2A0A1B0GU75 182 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1B0GUV1 79 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR2M5A3KFT3 312 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 C15orf62A8K5M9 175 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ANKRD66B4E2M5 251 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM178BH3BS89 294 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 EIF3DO15371 548 aaKnown RBP eCLIP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZNHIT1O43257 154 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GRID2O43424 1007 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SSX4O60224 188 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DKC1O60832 514 aaKnown RBP eCLIP1.45□□□□□ -2.189e-9■■■■□ 19.9
PRPF39-208ENST00000554785 WDR1O75083 606 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 LDB3O75112 727 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FRAT2O75474 233 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PSMD10O75832 226 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PLGP00747 810 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FAM106CPP0CH98 169 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CDH1P12830 882 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 HLA-DOBP13765 273 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SP100P23497 879 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 HOXD10P28358 340 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 EEF1DP29692 281 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IL15P40933 162 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RPS8P62241 208 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RPL36AP83881 106 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RUNX1T1Q06455 604 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZBTB17Q13105 803 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ALCAMQ13740 583 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SNTB1Q13884 538 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 KYNUQ16719 465 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IZUMO4Q1ZYL8 232 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CBWD6Q4V339 395 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RAB6CQ53S08 254 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CBWD3Q5JTY5 395 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ALS2CLQ60I27 953 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM211Q6ICI0 200 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR7E24Q6IFN5 339 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TEX38Q6PEX7 206 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 UNQ6126/PRO20091Q6UXV3 157 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DENND5BQ6ZUT9 1274 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PLPPR4Q7Z2D5 763 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 MUC20Q8N307 709 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FBXO39Q8N4B4 442 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GBGT1Q8N5D6 347 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RBM15BQ8NDT2 890 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RDM1Q8NG50 284 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR52I2Q8NH67 350 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 BBS10Q8TAM1 723 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 WDR20Q8TBZ3 569 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM255BQ8WV15 326 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 NR4A3Q92570 626 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PHF21AQ96BD5 680 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ERLEC1Q96DZ1 483 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IGSF21Q96ID5 467 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CNDP2Q96KP4 475 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 NEK1Q96PY6 1258 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 BAG1Q99933 345 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 C1QTNF4Q9BXJ3 329 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RAB6CQ9H0N0 254 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CSTL1Q9H114 145 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR10A4Q9H209 315 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RABEP2Q9H5N1 569 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DDX31Q9H8H2 851 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 HAO2Q9NYQ3 351 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF711Q9Y462 761 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 YIPF1Q9Y548 306 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PCDHGB1Q9Y5G3 927 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TECTAO75443 2155 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GPR179Q6PRD1 2367 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TRBC2A0A5B9 178 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 MED19A0JLT2 244 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PLSCR5A0PG75 271 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SMTNL1A8MU46 457 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DVL1O14640 695 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TBX10O75333 385 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 WISP2O76076 250 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF432O94892 652 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 BMP10O95393 424 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GGPS1O95749 300 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms