RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TSSK3Q96PN8 268 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ARHGEF4Q9NR80 690 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NDUFA13Q9P0J0 144 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 DVL1O14640 695 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SCAF4O95104 1147 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CSTBP04080 98 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 VIL1P09327 827 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ELFN1P0C7U0 828 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RBMS1P29558 406 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TGM4P49221 684 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 DVL1P1P54792 670 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC25A3Q00325 362 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF674Q2M3X9 581 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RHBDF2Q6PJF5 856 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF730Q6ZMV8 503 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC34A3Q8N130 599 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 DEFB108BQ8NET1 73 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FOXC2Q99958 501 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZBTB20Q9HC78 741 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 DNAAF2Q9NVR5 837 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TAGLN3Q9UI15 199 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GRID1Q9ULK0 1009 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FARSAQ9Y285 508 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PCDHB3Q9Y5E6 796 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 A0A1W2PPM1 405 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EYA4O95677 639 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC2A3P11169 496 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PREPP48147 710 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CARD18P57730 90 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TAS2R50P59544 299 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ADGRF1Q5T601 910 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OLIG3Q7RTU3 272 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OVCH1Q7RTY7 1134 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TNFRSF25Q93038 417 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHF1Q96S99 279 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FAM83CQ9BQN1 747 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CHCHD6Q9BRQ6 235 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 COMMD8Q9NX08 183 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 P4HTMQ9NXG6 502 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CKLFQ9UBR5 152 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZFC3H1O60293 1989 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SNRPAP09012 282 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 IL12AP29459 219 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TLX1P31314 330 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MTX3Q5HYI7 312 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC80Q76M96 950 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ST7LQ8TDW4 575 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NUAK2Q9H093 628 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHA3Q9HB20 300 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GDAP2Q9NXN4 497 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FOXP2O15409 715 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C1QTNF8P60827 252 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MRPS22P82650 360 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PAN3Q58A45 887 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZER1Q7Z7L7 766 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MB21D2Q8IYB1 491 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 UNC5BQ8IZJ1 945 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GALNT6Q8NCL4 622 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RORBQ92753 470 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PPM1MQ96MI6 270 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SLC38A7Q9NVC3 462 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FZD10Q9ULW2 581 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 IGKV3-7A0A075B6H7 116 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ADAMTS4O75173 837 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 HTR3BO95264 441 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 IL1AP01583 271 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LAMP2P13473 410 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF7P17097 686 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CLDN2P57739 230 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF100Q8IYN0 542 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CPSF7Q8N684 471 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF557Q8N988 423 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR6Y1Q8NGX8 325 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SOCS4Q8WXH5 440 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OSBPL7Q9BZF2 842 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 A1L4Q6 167 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR6C6A6NF89 314 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR2AT4A6NND4 320 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 H3BMM5 538 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CAMTA2O94983 1202 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PVRP15151 417 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GADD45AP24522 165 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ARSDP51689 593 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MAD2L1Q13257 205 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CAMK2DQ13557 499 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PIGHQ14442 188 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ERICH5Q6P6B1 374 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ARHGAP12Q8IWW6 846 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ELOA2Q8IYF1 753 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 VPS33AQ96AX1 596 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GANQ9H2C0 597 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SLAMF7Q9NQ25 335 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TRPV5Q9NQA5 729 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TVP23BQ9NYZ1 205 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LAMP5Q9UJQ1 280 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AGO1Q9UL18 857 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MAST1Q9Y2H9 1570 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms