RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ZNF282Q9UDV7 671 aaPredicted RBP8.62□□□□□ -1.03
PRKCH-208ENST00000553846 POLG2Q9UHN1 485 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 CRLS1Q9UJA2 301 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 ASF1AQ9Y294 204 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 HRH3Q9Y5N1 445 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 PRSS21Q9Y6M0 314 aa8.62□□□□□ -1.03
PRKCH-208ENST00000553846 CUBNO60494 3623 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 ANK2Q01484 3957 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 C5orf60A6NFR6 353 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 H7C0S8 307 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 LIN7AO14910 233 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-208ENST00000553846 RALBP11234 206 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 PSMA3P25788 255 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 GRIA3P42263 894 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 RAB28P51157 221 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
PRKCH-208ENST00000553846 HSF1Q00613 529 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 TUBA3CQ13748 450 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 DSG2Q14126 1118 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 DBN1Q16643 649 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 FIGNQ5HY92 759 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 TUBA3EQ6PEY2 450 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 FIGLAQ6QHK4 219 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 C3P1Q6ZMU1 363 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 RNF44Q7L0R7 432 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 HOOK3Q86VS8 718 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 MIEF2Q96C03 454 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 ARSGQ96EG1 525 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 SELENOSQ9BQE4 189 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 CCM2LQ9NUG4 571 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-208ENST00000553846 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 IRAK4Q9NWZ3 460 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 UVRAGQ9P2Y5 699 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 KCNN3Q9UGI6 736 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 PHF3Q92576 2039 aaKnown RBP8.61□□□□□ -1.03
PRKCH-208ENST00000553846 DNAJC13O75165 2243 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 RTTNQ86VV8 2226 aa8.61□□□□□ -1.03
PRKCH-208ENST00000553846 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 LOC105369274A0A096LPK9 316 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 LOC102723532A0A0G2JNH3 316 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 HYKKA2RU49 373 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ISM1B1AKI9 464 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 CFAP99D6REC4 459 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ASNA1O43681 348 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 MAN1A2O60476 641 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 NEURL1O76050 574 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 AP2A2O94973 939 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 S1PR4O95977 384 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 HOXD4P09016 255 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ZFXP17010 805 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ITGALP20701 1170 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 SLC26A3P40879 764 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 NR2C2P49116 596 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ADAM8P78325 824 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 FOLH1Q04609 750 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 LTBQ06643 244 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 GPR33Q49SQ1 333 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ZC3H12BQ5HYM0 836 aaKnown RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 WASHC2DQ5SRD0 308 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ALKBH5Q6P6C2 394 aaKnown RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 NAPRTQ6XQN6 538 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 SERPINA9Q86WD7 417 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 VRK3Q8IV63 474 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 OR4N4Q8N0Y3 316 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 BEST3Q8N1M1 668 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 CHDHQ8NE62 594 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 LILRB4Q8NHJ6 448 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 CA5BP1Q8WTZ4 195 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 CPLX3Q8WVH0 158 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 TFB1MQ8WVM0 346 aaKnown RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 SYN2Q92777 582 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 HDAC10Q969S8 669 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 IL17FQ96PD4 163 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 QKIQ96PU8 341 aaKnown RBP eCLIP8.6□□□□□ -1.034e-10■■■■■ 41.3
PRKCH-208ENST00000553846 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 GBA3Q9H227 469 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 LIME1Q9H400 295 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 VPS37BQ9H9H4 285 aa8.6□□□□□ -1.03
PRKCH-208ENST00000553846 STOX2Q9P2F5 926 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-208ENST00000553846 A0A1B0GTH6 734 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 NKX2-6A6NCS4 301 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 C2orf81A6NN90 581 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 KIAA1324LA8MWY0 1029 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-208ENST00000553846 FOXO6A8MYZ6 492 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 TARM1B6A8C7 271 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 NPIPA5E9PKD4 350 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 FFAR3O14843 346 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 GPR42O15529 346 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-208ENST00000553846 CTAG2O75638 210 aa8.59□□□□□ -1.03
PRKCH-208ENST00000553846 CD9P21926 228 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms