RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TRUB2O95900 331 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 IRF2P14316 349 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 EEF1B2P24534 225 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 PTGER4P35408 488 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 ACTN2P35609 894 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 HNF4AP41235 474 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 RPL21P46778 160 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 CCR3P51677 355 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 SLC8A3P57103 927 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 GUCY2DQ02846 1103 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 ZNF415Q09FC8 603 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 SNTB1Q13884 538 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.967e-8■■□□□ 11.8
VRK1-202ENST00000553683 HERC3Q15034 1050 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 CRY2Q49AN0 593 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 PHLDA2Q53GA4 152 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 GPR139Q6DWJ6 353 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 UGT3A1Q6NUS8 523 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 KRT74Q7RTS7 529 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 RTN4RL2Q86UN3 420 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 CDK20Q8IZL9 346 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 SYN2Q92777 582 aaPredicted RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 FAM20AQ96MK3 541 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 EGFL8Q99944 293 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 VGLL1Q99990 258 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 NUDT16L1Q9BRJ7 211 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 MXD3Q9BW11 206 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 CCDC106Q9BWC9 280 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 SHARPINQ9H0F6 387 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 THAP2Q9H0W7 228 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 C2CD4DB7Z1M9 353 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 ADAM20O43506 726 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 CEACAM4O75871 244 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 SMIM18P0DKX4 95 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 SLC2A2P11168 524 aaPredicted RBP2.81□□□□□ -1.96
VRK1-202ENST00000553683 CYP2A7P20853 494 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 PCGF2P35227 344 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 LHX1P48742 406 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 RGS19P49795 217 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 LMO4P61968 165 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 ELAVL2Q12926 359 aaKnown RBP2.81□□□□□ -1.96
VRK1-202ENST00000553683 DRP2Q13474 957 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 CUL3Q13618 768 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 ALCAMQ13740 583 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 UGP2Q16851 508 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 MTHFSDQ2M296 383 aaKnown RBP2.81□□□□□ -1.96
VRK1-202ENST00000553683 GLIPR1L2Q4G1C9 344 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 C2CD6Q53TS8 623 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 XKR3Q5GH77 459 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 TMEM207Q6UWW9 146 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 CAMKMTQ7Z624 323 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 RYBPQ8N488 228 aaPredicted RBP2.81□□□□□ -1.96
VRK1-202ENST00000553683 SPEM1Q8N4L4 309 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 TC2NQ8N9U0 490 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 POGLUT1Q8NBL1 392 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 GPRC5AQ8NFJ5 357 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 KBTBD8Q8NFY9 601 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 FAM222BQ8WU58 562 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 NXNL1Q96CM4 212 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 CFAP57Q96MR6 1250 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 FEVQ99581 238 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 PKP2Q99959 881 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 APOL6Q9BWW8 343 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 ZMYND12Q9H0C1 365 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 Q9H8V8 135 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 MED20Q9H944 212 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 MYNNQ9NPC7 610 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 SLC24A2Q9UI40 661 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 RPS6KA6Q9UK32 745 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 PPP1R3CQ9UQK1 317 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 SMAD5-AS1Q9Y6J3 95 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 ARID2Q68CP9 1835 aa2.81□□□□□ -1.96
VRK1-202ENST00000553683 EDDM13A0A1B0GTR0 161 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 A0A1W2PPM1 405 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.8□□□□□ -1.96
VRK1-202ENST00000553683 MOCS3O95396 460 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 STARD3NLO95772 234 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 EPCAMP16422 314 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 DNASE1P24855 282 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 MPZP25189 248 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 TLX1P31314 330 aaPredicted RBP2.8□□□□□ -1.96
VRK1-202ENST00000553683 TSFMP43897 325 aaKnown RBP2.8□□□□□ -1.96
VRK1-202ENST00000553683 VAMP7P51809 220 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 MAPK12P53778 367 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 TMEM50BP56557 158 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 CLDN15P56746 228 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 HNRNPKP61978 463 aaKnown RBP eCLIP2.8□□□□□ -1.96
VRK1-202ENST00000553683 MYL7Q01449 175 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 NFATC2Q13469 925 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 IL11RAQ14626 422 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 FASTKD3Q14CZ7 662 aaKnown RBP2.8□□□□□ -1.96
VRK1-202ENST00000553683 RALBP1Q15311 655 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 NPTX1Q15818 432 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 MCMDC2Q4G0Z9 681 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 SLC25A53Q5H9E4 307 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 C9orf152Q5JTZ5 239 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 ARMC4Q5T2S8 1044 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 NOTUMQ6P988 496 aa2.8□□□□□ -1.96
VRK1-202ENST00000553683 DOK6Q6PKX4 331 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms