RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 FER1L6-AS2Q96M78 137 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CEP295NLQ96MC4 621 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 OR2A14Q96R47 310 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 TMEM175Q9BSA9 504 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 PCGF1Q9BSM1 259 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 NAA11Q9BSU3 229 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 THAP7Q9BT49 309 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 NUP85Q9BW27 656 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CXCL16Q9H2A7 254 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 PDZD7Q9H5P4 517 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 C8orf33Q9H7E9 229 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ADPRHL2Q9NX46 363 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ABI3Q9P2A4 366 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 DDX25Q9UHL0 483 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 OSGIN1Q9UJX0 560 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ACAD8Q9UKU7 415 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 PADI1Q9ULC6 663 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ODF2LQ9ULJ1 636 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 HES2Q9Y543 173 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 VWA8A3KMH1 1905 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 MYH7P12883 1935 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 SALL3Q9BXA9 1300 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 NBASA2RRP1 2371 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 EDDM13A0A1B0GTR0 161 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 GTPBP10A4D1E9 387 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 HSPB2A8KAH6 182 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 POC1B-GALNT4F8VUJ3 575 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 RHODO00212 210 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CHADO15335 359 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ATG13O75143 517 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 JTBO76095 146 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SEC24AO95486 1093 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 APBB3O95704 486 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 PENKP01210 267 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SERPINF2P08697 491 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CHRM5P08912 532 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 TCEA1P23193 301 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CLDN2P57739 230 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 C21orf58P58505 322 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 GRIK3Q13003 919 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ITGB3BPQ13352 177 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SEMA3AQ14563 771 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 IL11RAQ14626 422 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SHBQ15464 509 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 HSPB2Q16082 182 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 DUOXA1Q1HG43 343 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SMU1Q2TAY7 513 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 TTC31Q49AM3 519 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SYTL3Q4VX76 610 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ISM2Q6H9L7 571 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 IYDQ6PHW0 289 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 FAM43BQ6ZT52 329 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 LPCAT2Q7L5N7 544 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SPATA21Q7Z572 469 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 MRPL10Q7Z7H8 261 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 GLCCI1Q86VQ1 547 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CCDC60Q8IWA6 550 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SIX6OS1Q8N1H7 587 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CARNMT1Q8N4J0 409 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 LRRC57Q8N9N7 239 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 TC2NQ8N9U0 490 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 TRIML1Q8N9V2 468 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CAMKVQ8NCB2 501 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 HUS1BQ8NHY5 278 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 URGCPQ8TCY9 931 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 KCNE4Q8WWG9 221 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 WBP1Q96G27 269 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CDRT15Q96T59 188 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SH2D3AQ9BRG2 576 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SLC25A23Q9BV35 468 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 NACAP1Q9BZK3 213 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CDT1Q9H211 546 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF304Q9HCX3 659 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CHMP1AQ9HD42 196 aaPredicted RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ZDHHC4Q9NPG8 344 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 GKN1Q9NS71 199 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 GAR1Q9NY12 217 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ASIC5Q9NY37 505 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SEMA5BQ9P283 1151 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 COPG2Q9UBF2 871 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 SLC9A2Q9UBY0 812 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 PLAGL1Q9UM63 463 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 EXO1Q9UQ84 846 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 PIN4Q9Y237 131 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 LSM4Q9Y4Z0 139 aaKnown RBP3.72□□□□□ -1.81
LIMA1-208ENST00000551691 UBIAD1Q9Y5Z9 338 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 CSMD2Q7Z408 3487 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 MYH6P13533 1939 aa3.72□□□□□ -1.81
LIMA1-208ENST00000551691 FRMPD4Q14CM0 1322 aa3.71□□□□□ -1.81
LIMA1-208ENST00000551691 IGKV6D-21A0A0A0MT36 114 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 CLEC18AA5D8T8 446 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 TMEM150BA6NC51 233 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 ARL5CA6NH57 179 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 CBY3A6NI87 242 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 FAM90A8PA6NJQ4 464 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 KLRF2D3W0D1 207 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 I3L4J1 428 aa3.71□□□□□ -1.82
LIMA1-208ENST00000551691 MEIS2O14770 477 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms