RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FGF11Q92914 225 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 AZIN2Q96A70 460 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SARAFQ96BY9 339 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ELP4Q96EB1 424 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 BMFQ96LC9 184 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 NSMCE3Q96MG7 304 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF560Q96MR9 790 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 FCRL5Q96RD9 977 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 USP28Q96RU2 1077 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF347Q96SE7 839 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 BARD1Q99728 777 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA3CQ99985 751 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TREX2Q9BQ50 279 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CHCHD6Q9BRQ6 235 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.37□□□□□ -2.033e-8■□□□□ 9.6
CPSF6-207ENST00000551516 NUP58Q9BVL2 599 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 IFT27Q9BW83 186 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 GTPBP2Q9BX10 602 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 GPR174Q9BXC1 333 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC2A11Q9BYW1 496 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC25A18Q9H1K4 315 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 NEUROG2Q9H2A3 272 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 KLK15Q9H2R5 256 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PRDM13Q9H4Q3 707 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC32A1Q9H598 525 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TRPC7Q9HCX4 862 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 DNAJC17Q9NVM6 304 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM248Q9NWD8 314 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TBC1D7Q9P0N9 293 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC25A10Q9UBX3 287 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CYTH4Q9UIA0 394 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 XPO7Q9UIA9 1087 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLCO3A1Q9UIG8 710 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ADAM21Q9UKJ8 722 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 MTMR6Q9Y217 621 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TRAF3IP3Q9Y228 551 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 THADAQ6YHU6 1953 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RALGAPA1Q6GYQ0 2036 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CITO14578 2027 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TEX13CA0A0J9YWL9 993 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 C17orf113A0A1B0GUU1 675 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GOLGA6L7A0A1B0GV03 622 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1B0GVM2 712 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PVALEFA0A1B0GWK0 134 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TCRBV7S3A2A0A539 114 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 DYTNA2CJ06 578 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 DPPA5A6NC42 116 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 WIPF3A6NGB9 483 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF233A6NK53 670 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TTC36A6NLP5 189 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 YJEFN3A6XGL0 299 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 E7ENQ6 273 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 NEDD8-MDP1E9PL57 170 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 J3QKU1 62 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 O00370 1275 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RRHO14718 337 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 IKBKBO14920 756 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MAPK13O15264 365 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RAD51BO15315 384 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MSI1O43347 362 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TIMM44O43615 452 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 KIF1CO43896 1103 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CEP104O60308 925 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZMPSTE24O75844 475 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CCNDBP1O95273 360 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 LATS1O95835 1130 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SCGB1D1O95968 90 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PLAUP00749 431 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 IL1AP01583 271 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SPARCP09486 303 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MBL2P11226 248 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CYP2A6P11509 494 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FCGR2AP12318 317 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RARGP13631 454 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 KRT10P13645 584 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 C6P13671 934 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ST6GAL1P15907 406 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CKMT2P17540 419 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GAP43P17677 238 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GM2AP17900 193 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 KRT4P19013 534 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TFEBP19484 476 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TACR2P21452 398 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 DGKAP23743 735 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GJB2P29033 226 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TYK2P29597 1187 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ABCD1P33897 745 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ATP5C1P36542 298 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MATKP42679 507 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SOX2P48431 317 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 HARS2P49590 506 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CYP2J2P51589 502 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SLC12A2P55011 1212 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 INHBCP55103 352 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 EIF3BP55884 814 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SNRPFP62306 86 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TUBA4AP68366 448 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MYL7Q01449 175 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms