RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SLC1A2P43004 574 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TTPAP49638 278 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 CSE1LP55060 971 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 ADARP55265 1226 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 ITGA1P56199 1179 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 RPA4Q13156 261 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 CTBP1Q13363 440 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 NADK2Q4G0N4 442 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 ZNF658BQ4V348 819 aaPredicted RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 RNF187Q5TA31 235 aaPredicted RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 ZNF470Q6ECI4 717 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 PACS1Q6VY07 963 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 LRRC6Q86X45 466 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 IQCKQ8N0W5 287 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TRAPPC9Q96Q05 1148 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TTC1Q99614 292 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TFB2MQ9H5Q4 396 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 INTS10Q9NVR2 710 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 IRAK4Q9NWZ3 460 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 NSMCE4AQ9NXX6 385 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 ASF1AQ9Y294 204 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TDRKHQ9Y2W6 561 aaKnown RBP12.95□□□□□ -0.34
NUP188-211ENST00000550219 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
NUP188-211ENST00000550219 A6NL46 340 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 C9J4A7 227 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 ZNF749O43361 778 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 PIAS1O75925 651 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 AHSGP02765 367 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 FTH1P02794 183 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 RAB40ALP0C0E4 278 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 RPS3P23396 243 aaKnown RBP eCLIP12.94□□□□□ -0.34
NUP188-211ENST00000550219 NSG1P42857 185 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 UQCRFS1P47985 274 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 CD151P48509 253 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 MPP1Q00013 466 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 SRSF1Q07955 248 aaKnown RBP eCLIP12.94□□□□□ -0.34
NUP188-211ENST00000550219 RAPSNQ13702 412 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 EFTUD2Q15029 972 aaKnown RBP eCLIP12.94□□□□□ -0.34
NUP188-211ENST00000550219 NCF4Q15080 339 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 KLHL38Q2WGJ6 581 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 SPESP1Q6UW49 350 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 ZNF517Q6ZMY9 492 aaPredicted RBP12.94□□□□□ -0.34
NUP188-211ENST00000550219 GPR135Q8IZ08 494 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 ADGRF3Q8IZF5 1079 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 C19orf47Q8N9M1 422 aaKnown RBP12.94□□□□□ -0.34
NUP188-211ENST00000550219 UHMK1Q8TAS1 419 aaKnown RBP12.94□□□□□ -0.34
NUP188-211ENST00000550219 SLC44A1Q8WWI5 657 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 LPGAT1Q92604 370 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 CPNE1Q99829 537 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 DHRS4Q9BTZ2 278 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 NLNQ9BYT8 704 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 PITPNM3Q9BZ71 974 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 SYTL2Q9HCH5 934 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 SLC17A6Q9P2U8 582 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 SERTAD3Q9UJW9 196 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 NFS1Q9Y697 457 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 HECTD1Q9ULT8 2610 aa12.94□□□□□ -0.34
NUP188-211ENST00000550219 LIN7AO14910 233 aaPredicted RBP12.93□□□□□ -0.34
NUP188-211ENST00000550219 PFDN6O15212 129 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 OR1I1O60431 355 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 VPS4BO75351 444 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 NDUFS3O75489 264 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 HAUS5O94927 633 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 AP2A2O94973 939 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 SHBGP04278 402 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 UGT2B7P16662 529 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 GCAP28676 217 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 OTX2P32243 289 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 SHMT2P34897 504 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 GP5P40197 560 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 ILF2Q12905 390 aaKnown RBP12.93□□□□□ -0.34
NUP188-211ENST00000550219 ATP1A4Q13733 1029 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 RASA2Q15283 850 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 STRA8Q7Z7C7 330 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 CTAGE3PQ8IX95 158 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 FAM26EQ8N5C1 309 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 PPM1NQ8N819 430 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 ADAMTS17Q8TE56 1095 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 BIRC8Q96P09 236 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 TMEM109Q9BVC6 243 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms