RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SPPL3Q8TCT6 385 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 MAGEE2Q8TD90 523 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 CYGBQ8WWM9 190 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 FIG4Q92562 907 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 UBE2E3Q969T4 207 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 TCEAL4Q96EI5 215 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 SLC47A1Q96FL8 570 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 AURKBQ96GD4 344 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 FCRL1Q96LA6 429 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 MRGPRX3Q96LB0 322 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 HBEGFQ99075 208 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 P2RY13Q9BPV8 354 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 RBM4BQ9BQ04 359 aaKnown RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 EFCAB11Q9BUY7 163 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 RBM4Q9BWF3 364 aaKnown RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 ASPSCR1Q9BZE9 553 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 GRIP2Q9C0E4 1043 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 ITM2CQ9NQX7 267 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 DYRK4Q9NR20 520 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 FARSBQ9NSD9 589 aaKnown RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 THG1LQ9NWX6 298 aaKnown RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 VAPAQ9P0L0 249 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 IFT80Q9P2H3 777 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-209ENST00000550020 CD84Q9UIB8 345 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 SLC22A14Q9Y267 594 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 WNT6Q9Y6F9 365 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 AK5Q9Y6K8 562 aa8.7□□□□□ -1.02
TMEM116-209ENST00000550020 TRBV5-3A0A0A0MS03 114 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 C17orf113A0A1B0GUU1 675 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 SLC5A10A0PJK1 596 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 KLHL33A6NCF5 533 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 HIDE1A8MVS5 230 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TTC34A8MYJ7 566 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 C5orf67F2Z3F1 127 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 G3V2T6 193 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 H3BM21 787 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 KPNA3O00505 521 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ACOX3O15254 700 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 SGTAO43765 313 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 VEGFDO43915 354 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 EPN2O95208 641 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 CST1P01037 141 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 THRBP10828 461 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 AMD1P17707 334 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 SDC1P18827 310 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 CDH2P19022 906 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 EPORP19235 508 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ITGB7P26010 798 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ITGB8P26012 769 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ETV3P41162 512 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 GRIA2P42262 883 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 MTHFRP42898 656 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 RAD23AP54725 363 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ARSFP54793 590 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TPD52P55327 224 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM115Q12893 351 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 MTAPQ13126 283 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 LSAMPQ13449 338 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 PDGFRLQ15198 375 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 NOXRED1Q6NXP6 359 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 NEK5Q6P3R8 708 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 AGTRAPQ6RW13 159 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 LIPIQ6XZB0 460 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 GCNT7Q6ZNI0 430 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 NUDT18Q6ZVK8 323 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ZCCHC7Q8N3Z6 543 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 OR10A6Q8NH74 314 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ADAMTS16Q8TE57 1224 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 RAB7BQ96AH8 199 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 MTFMTQ96DP5 389 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 NRBF2Q96F24 287 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 DTD2Q96FN9 168 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TUBA1CQ9BQE3 449 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 CPPED1Q9BRF8 314 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 PAIP1Q9H074 479 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ABCG8Q9H221 673 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 LINC00597Q9H2U6 94 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 EHD1Q9H4M9 534 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 KAT8Q9H7Z6 458 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 DCAF13Q9NV06 445 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 ATAD3AQ9NVI7 634 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 DDX18Q9NVP1 670 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 OBP2AQ9NY56 170 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 USE1Q9NZ43 259 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 DEC1Q9P2X7 70 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
TMEM116-209ENST00000550020 C3orf18Q9UK00 162 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 TMPRSS11EQ9UL52 423 aa8.69□□□□□ -1.02
TMEM116-209ENST00000550020 OBSL1O75147 1896 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms