RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 OR4K1Q8NGD4 311 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 DEPDC1BQ8WUY9 529 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 PHLDA1Q8WV24 401 aaPredicted RBP5.6□□□□□ -1.51
NPAS3-204ENST00000546849 KCNE4Q8WWG9 221 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 FAM162AQ96A26 154 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 ADPGKQ9BRR6 497 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 THUMPD3Q9BV44 507 aaKnown RBP5.6□□□□□ -1.51
NPAS3-204ENST00000546849 KATNB1Q9BVA0 655 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 LAT2Q9GZY6 243 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 FZD8Q9H461 694 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 CHST11Q9NPF2 352 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 PPANQ9NQ55 473 aaKnown RBP5.6□□□□□ -1.51
NPAS3-204ENST00000546849 FAM207AQ9NSI2 230 aaPredicted RBP5.6□□□□□ -1.51
NPAS3-204ENST00000546849 STUB1Q9UNE7 303 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 LRP12Q9Y561 859 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 TRIM17Q9Y577 477 aa5.6□□□□□ -1.51
NPAS3-204ENST00000546849 CTTNBP2Q8WZ74 1663 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CEP170Q5SW79 1584 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CNTNAP2Q9UHC6 1331 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 ARPC2O15144 300 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 PCDH7O60245 1069 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 EDN1P05305 212 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 PLA2G4BP0C869 781 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 EPCAMP16422 314 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 ANOS1P23352 680 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CEACAM8P31997 349 aaPredicted RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 PRKCIP41743 596 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 ALDH3A2P51648 485 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 HERV-K104P61576 105 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 RBP5P82980 135 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CDR2Q01850 454 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 POU5F1Q01860 360 aaKnown RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 BFSP1Q12934 665 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 ITGA7Q13683 1181 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 GTDC1Q4AE62 458 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 KLHL22Q53GT1 634 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CYP4A22Q5TCH4 519 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CAVIN1Q6NZI2 390 aaKnown RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 SUSD1Q6UWL2 747 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 RTN4RL2Q86UN3 420 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 MMD2Q8IY49 270 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 NOA1Q8NC60 698 aaKnown RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 KBTBD8Q8NFY9 601 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 OR13C3Q8NGS6 347 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 VANGL1Q8TAA9 524 aaPredicted RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 CENPTQ96BT3 561 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 SNX25Q9H3E2 840 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 MRGBPQ9NV56 204 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 ZNF624Q9P2J8 865 aaPredicted RBP5.59□□□□□ -1.51
NPAS3-204ENST00000546849 KCNJ14Q9UNX9 436 aa5.59□□□□□ -1.51
NPAS3-204ENST00000546849 SHROOM2Q13796 1616 aa5.59□□□□□ -1.52
NPAS3-204ENST00000546849 MAGI1Q96QZ7 1491 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 A0A1W2PPW3 197 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 HTR3EA5X5Y0 456 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 C2orf81A6NN90 581 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 ENO4A6NNW6 628 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 PMS2P5A8MQ11 134 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 ZNF197O14709 1029 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 RPN1P04843 607 aaKnown RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 CSN3P07498 182 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 UMODP07911 640 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 IFNAR1P17181 557 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 ITGA3P26006 1051 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 CSTF2P33240 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 DLK1P80370 383 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 NPTX1Q15818 432 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 UGT3A2Q3SY77 523 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 C20orf194Q5TEA3 1177 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 TRAT1Q6PIZ9 186 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 MFSD6Q6ZSS7 791 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 SUSD6Q92537 303 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 FBXO17Q96EF6 278 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 FAM71F1Q96KD3 344 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 FAM20AQ96MK3 541 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 ZMYND12Q9H0C1 365 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 FAM49AQ9H0Q0 323 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 TRPV4Q9HBA0 871 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 SLC52A3Q9NQ40 469 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 SDR39U1Q9NRG7 319 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 C19orf25Q9UFG5 118 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 RASAL2Q9UJF2 1139 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 TNNQ9UQP3 1299 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 C2CD2Q9Y426 696 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 CFAP43Q8NDM7 1665 aa5.58□□□□□ -1.52
NPAS3-204ENST00000546849 POLA1P09884 1462 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-204ENST00000546849 RAB3GAP2Q9H2M9 1393 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 LTBP4Q8N2S1 1624 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 BLOC1S5-TXNDC5H3BN57 136 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 SNX3O60493 162 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 VIMP08670 466 aaKnown RBP5.57□□□□□ -1.52
NPAS3-204ENST00000546849 UBASH3AP57075 661 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 LINC01547P58512 204 aaPredicted RBP5.57□□□□□ -1.52
NPAS3-204ENST00000546849 ILF2Q12905 390 aaKnown RBP5.57□□□□□ -1.52
NPAS3-204ENST00000546849 UGCGQ16739 394 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 SLC35D3Q5M8T2 416 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 C6orf136Q5SQH8 315 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 SHEQ5VZ18 495 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 ABI3BPQ7Z7G0 1075 aa5.57□□□□□ -1.52
NPAS3-204ENST00000546849 PHLDB2Q86SQ0 1253 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms