RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RAB28P51157 221 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ARL4CP56559 192 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 TUBB4BP68371 445 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ABHD18Q0P651 414 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 CTBP1Q13363 440 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 TUBB3Q13509 450 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 TUBB2AQ13885 445 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 MAP7Q14244 749 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 TTLL9Q3SXZ7 439 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 BBS9Q3SYG4 887 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 SPANXN3Q5MJ09 141 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 WIPI1Q5MNZ9 446 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-224ENST00000544990 CTSL3PQ5NE16 218 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ZNF470Q6ECI4 717 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 HIBCHQ6NVY1 386 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-224ENST00000544990 LINC00114Q6XXX2 140 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 SYT10Q6XYQ8 523 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 UNC5AQ6ZN44 842 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 GK5Q6ZS86 529 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 CENPUQ71F23 418 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 KCNMB4Q86W47 210 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 VRK3Q8IV63 474 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 DCUN1D3Q8IWE4 304 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ADGRF3Q8IZF5 1079 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ESX1Q8N693 406 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 OR8K5Q8NH50 307 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 LKAAEAR1Q8TD35 194 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 RAD51AP1Q96B01 352 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 SLC22A18Q96BI1 424 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 LRRC39Q96DD0 335 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ELMO2Q96JJ3 720 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 UBL7Q96S82 380 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-224ENST00000544990 KRT12Q99456 494 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 EBNA1BP2Q99848 306 aaKnown RBP7.13□□□□□ -1.27
CPSF7-224ENST00000544990 TUBB2BQ9BVA1 445 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 RAB11FIP5Q9BXF6 653 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ULBP3Q9BZM4 244 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 SPRY4Q9C004 299 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
CPSF7-224ENST00000544990 XKR8Q9H6D3 395 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 FGF21Q9NSA1 209 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ACTR10Q9NZ32 417 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 IL1RAPL1Q9NZN1 696 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 FBXO5Q9UKT4 447 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 SLC39A10Q9ULF5 831 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 ICKQ9UPZ9 632 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 BTRCQ9Y297 605 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 COMMD10Q9Y6G5 202 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 PKD1L2Q7Z442 2459 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 WDFY3Q8IZQ1 3526 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 AHCTF1Q8WYP5 2266 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 PCM1Q15154 2024 aa7.13□□□□□ -1.27
CPSF7-224ENST00000544990 PTPRQQ9UMZ3 2332 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 BPTFQ12830 3046 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 EIF4E1BA6NMX2 242 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ISM1B1AKI9 464 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 NIPSNAP2O75323 286 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 KIAA0754O94854 1291 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 SEC31AO94979 1220 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 DLGAP3O95886 979 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 CHRM5P08912 532 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ATP5DP30049 168 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 CCNFP41002 786 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 SLC1A2P43004 574 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ITGA8P53708 1063 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 SNRPNP63162 240 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 CALCOCO2Q13137 446 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 KCNAB1Q14722 419 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 CRYMQ14894 314 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 KIR2DS3Q14952 304 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 KYNUQ16719 465 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TAF1BQ53T94 588 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 HSP90AA5PQ58FG0 334 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ZNF789Q5FWF6 425 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 UGT3A1Q6NUS8 523 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 SPESP1Q6UW49 350 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 C6orf15Q6UXA7 325 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 NEK10Q6ZWH5 1172 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ACAD11Q709F0 780 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TIPARPQ7Z3E1 657 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 VASH2Q86V25 355 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 DENND6AQ8IWF6 608 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 AGGF1Q8N302 714 aaeCLIP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 C17orf53Q8N3J3 647 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ZBTB2Q8N680 514 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 LSM14AQ8ND56 463 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 SPATA4Q8NEY3 305 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 N4BP2L2Q92802 583 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 KCNJ9Q92806 393 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TCTN2Q96GX1 697 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TRAPPC9Q96Q05 1148 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TRIM51Q9BSJ1 452 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 PITPNM3Q9BZ71 974 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 TRIM31Q9BZY9 425 aa7.12□□□□□ -1.27
CPSF7-224ENST00000544990 GPN2Q9H9Y4 310 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 PPANQ9NQ55 473 aaKnown RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 FBXO6Q9NRD1 293 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-224ENST00000544990 IARS2Q9NSE4 1012 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms