RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 DSC3Q14574 896 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 SSX6Q7RTT6 188 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 HDDC3Q8N4P3 179 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PHC3Q8NDX5 983 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 COQ8AQ8NI60 647 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PYCR2Q96C36 320 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 TGFB1P01137 390 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ENGP17813 658 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 FOXN2P32314 431 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 HMGCS1Q01581 520 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PDCD4Q53EL6 469 aaKnown RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 ACOT12Q8WYK0 555 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 SIRPGQ9P1W8 387 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 NEMP2A6NFY4 417 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ARPC2O15144 300 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 RPS3AP61247 264 aaKnown RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 ADAM15Q13444 863 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ZNF267Q14586 743 aaPredicted RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 C10orf82Q8WW14 230 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ZNF226Q9NYT6 803 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PCDHGB7Q9Y5F8 929 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 SLC31A1O15431 190 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 XPNPEP2O43895 674 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 STOMP27105 288 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PBX1P40424 430 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 APLP1P51693 650 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ATXN7L3Q14CW9 347 aaPredicted RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 ANKDD1AQ495B1 522 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 TRAV6A0A075B6T7 132 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 C8GP07360 202 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 GLUD2P49448 558 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 PCBP1Q15365 356 aaKnown RBP eCLIP15.12■□□□□ 0.014e-12■■■■□ 25.3
CHD4-210ENST00000544040 SLC16A10Q8TF71 515 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 CANT1Q8WVQ1 401 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 GATAD2BQ8WXI9 593 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 TLCD1Q96CP7 247 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 ZBED6CLQ96FA7 236 aaPredicted RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 COL21A1Q96P44 957 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 MIPEPQ99797 713 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 VNN3Q9NY84 501 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 NKX1-2Q9UD57 310 aaPredicted RBP15.12■□□□□ 0.01
CHD4-210ENST00000544040 FZD10Q9ULW2 581 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 E2F3O00716 465 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PPM1BO75688 479 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 KAT7O95251 611 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 CYP27C1Q4G0S4 372 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 MOB2Q70IA6 237 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 GALNT12Q8IXK2 581 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 OVCA2Q8WZ82 227 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 SMURF2Q9HAU4 748 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 RUVBL1Q9Y265 456 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 AGPSO00116 658 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 KHNYNO15037 678 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 NUAK1O60285 661 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PCDHGA12O60330 932 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 DIRAS1O95057 198 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 SLC7A1P30825 629 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 CDKN1CP49918 316 aaPredicted RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 SH3PXD2AQ5TCZ1 1133 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 XKRXQ6PP77 449 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 MKL1Q969V6 931 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PRICKLE1Q96MT3 831 aaPredicted RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 TAS2R1Q9NYW7 299 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 DERAQ9Y315 318 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 TAS2R39P59534 338 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 HYAL2Q12891 473 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 BTBD16Q32M84 506 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 TUBA3EQ6PEY2 450 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 MND1Q9BWT6 205 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 HCN3Q9P1Z3 774 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 TNFRSF10DQ9UBN6 386 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 HYKKA2RU49 373 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 BCHEP06276 602 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 DSG2Q14126 1118 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 ANKRD23Q86SG2 305 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 HID1Q8IV36 788 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PNLDC1Q8NA58 520 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 TMEM145Q8NBT3 493 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 OR2AG1Q9H205 316 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 XKR8Q9H6D3 395 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 POLE4Q9NR33 117 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 GNG8Q9UK08 70 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 PPM1HQ9ULR3 514 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 ENTPD6O75354 484 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 UBXN7O94888 489 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 DNAJA1P31689 397 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 PSMA6P60900 246 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 TBC1D25Q3MII6 688 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 INTS6LQ5JSJ4 861 aaKnown RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 TREML2Q5T2D2 321 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 THEM6Q8WUY1 208 aa15.11■□□□□ 0.01
CHD4-210ENST00000544040 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
CHD4-210ENST00000544040 TESCQ96BS2 214 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms