RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 MYRFLQ96LU7 910 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 RBM4BQ9BQ04 359 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TMEM175Q9BSA9 504 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 HTATIP2Q9BUP3 242 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 RBM4Q9BWF3 364 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 STRA6Q9BX79 667 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 HDHD5Q9BXW7 423 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TRIM54Q9BYV2 358 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 MRPL37Q9BZE1 423 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SLIRPQ9GZT3 109 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 LHPPQ9H008 270 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SDCBP2Q9H190 292 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TTYH1Q9H313 450 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ZBTB3Q9H5J0 574 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ASB7Q9H672 318 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 RNF121Q9H920 327 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 KANSL2Q9H9L4 492 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 CERS4Q9HA82 394 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 RANGRFQ9HD47 186 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ALG13Q9NP73 1137 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TREM1Q9NP99 234 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 EMC7Q9NPA0 242 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 CCNB1IP1Q9NPC3 277 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 DYRK4Q9NR20 520 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 POLE4Q9NR33 117 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 DUS2Q9NX74 493 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 FBXL12Q9NXK8 326 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SMPD3Q9NY59 655 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TAS2R10Q9NYW0 307 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 USE1Q9NZ43 259 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 COQ3Q9NZJ6 369 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TMEM181Q9P2C4 612 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 APOBEC3BQ9UH17 382 aaKnown RBP5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ZNRF3Q9ULT6 936 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SHOC2Q9UQ13 582 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ERVW-1Q9UQF0 538 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SLC9A8Q9Y2E8 581 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 SLC6A5Q9Y345 797 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 PCDHA10Q9Y5I2 948 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 ATRNO75882 1429 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 A0A087X0T9 212 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 RNF103-CHMP3A0A140T963 221 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 MYOCOSA0A1B0GUC4 107 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 A0A1B0GV90 55 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 A0A1W2PRB8 838 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 LNP1A1A4G5 178 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 LRRC14BA6NHZ5 514 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ASB14A6NK59 587 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 AQP12BA6NM10 295 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 KDM4EB2RXH2 506 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PRR23D1E9PI22 279 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 H0YIN7 160 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 NFIBO00712 420 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ADAM10O14672 748 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 MYL12BO14950 172 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 GSTA4O15217 222 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 EFSO43281 561 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 SEC14L5O43304 696 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ORC5O43913 435 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 DPM1O60762 260 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 MMP20O60882 483 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 SNNO75324 88 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 H2AFYO75367 372 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PRKRAO75569 313 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 POP7O75817 140 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 SRP72O76094 671 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PGK1P00558 417 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 HMGCRP04035 888 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 CRHP06850 196 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 HCKP08631 526 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 CLTBP09497 229 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PRR23D2P0DMB1 279 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 UMPSP11172 480 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 CKMT1AP12532 417 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PAMP19021 973 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 MYL12AP19105 171 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 HLA-DPA1P20036 260 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 POU3F3P20264 500 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PVALBP20472 110 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 HNF1AP20823 631 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ADRA1DP25100 572 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 FASP25445 335 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ACADLP28330 430 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ADH6P28332 368 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 EPHA3P29320 983 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 MC3RP41968 323 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ACOT2P49753 483 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 RAB5CP51148 216 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 KPNA2P52292 529 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 EPHA5P54756 1037 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 EPHA4P54764 986 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 GDF10P55107 478 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 CASP9P55211 416 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 NUTF2P61970 127 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 YWHAZP63104 245 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 PURAQ00577 322 aaKnown RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ACSM1Q08AH1 577 aa5.07□□□□□ -1.6
SNHG1-218ENST00000541615 ZNF155Q12901 538 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-218ENST00000541615 GRB10Q13322 594 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms