RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ZFP28Q8NHY6 868 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 CAGE1Q8TC20 777 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 TAS1R2Q8TE23 839 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 CACTINQ8WUQ7 758 aaKnown RBP5.37□□□□□ -1.55
DDB1-219ENST00000541513 WFDC12Q8WWY7 111 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 APBB2Q92870 758 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 AZIN2Q96A70 460 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 NXNL1Q96CM4 212 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 LIN37Q96GY3 246 aaPredicted RBP5.37□□□□□ -1.55
DDB1-219ENST00000541513 ARL5BQ96KC2 179 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 C7orf34Q96L11 122 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 LRRC37BQ96QE4 947 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 LMF1Q96S06 567 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 ZNF607Q96SK3 696 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 SPAG8Q99932 426 aaPredicted RBP5.37□□□□□ -1.55
DDB1-219ENST00000541513 ELOVL1Q9BW60 279 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 NSRP1Q9H0G5 558 aaKnown RBP5.37□□□□□ -1.55
DDB1-219ENST00000541513 FN3KQ9H479 309 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 C8orf33Q9H7E9 229 aaPredicted RBP5.37□□□□□ -1.55
DDB1-219ENST00000541513 PTGFRNQ9P2B2 879 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 PRELID1Q9Y255 219 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 SLC5A6Q9Y289 635 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 LOC285556D6RIA3 1793 aa5.37□□□□□ -1.55
DDB1-219ENST00000541513 A0A1W2PN81 502 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 GSAPA4D1B5 854 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 KBTBD13C9JR72 458 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 UBE2Q2LH0YL09 131 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CYR61O00622 381 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CLDN4O14493 209 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 ANKRD28O15084 1053 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 STRNO43815 780 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 RANBP6O60518 1105 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 CSDE1O75534 798 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 RSL1D1O76021 490 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 PDE9AO76083 593 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 C8BP07358 591 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 RPSAP08865 295 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 SPATA31D3P0C874 917 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CYP2D6P10635 497 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CLUP10909 449 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SLC2A4P14672 509 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 EDN2P20800 178 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 GCSHP23434 173 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 ACAT1P24752 427 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 ITGB8P26012 769 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 TKTP29401 623 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 CXCR5P32302 372 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CHRNA7P36544 502 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SLC6A12P48065 614 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CCT8P50990 548 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 BLVRAP53004 296 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CACNA2D1P54289 1103 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 BPIFB4P59827 614 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 EGR4Q05215 589 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 HSPB3Q12988 150 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SRSF5Q13243 272 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 TUBA3CQ13748 450 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PDK3Q15120 406 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PDK4Q16654 411 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 USP41Q3LFD5 358 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PLAC9Q5JTB6 97 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 DCST1Q5T197 706 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 ARMC12Q5T9G4 340 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 LIN9Q5TKA1 542 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 KRT40Q6A162 431 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 AAGABQ6PD74 315 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CORO6Q6QEF8 472 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 C6orf89Q6UWU4 347 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SPATA31D4Q6ZUB0 917 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 LARP4Q71RC2 724 aaKnown RBP eCLIP5.36□□□□□ -1.55
DDB1-219ENST00000541513 PIGWQ7Z7B1 504 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 KLHDC8AQ8IYD2 350 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CENPLQ8N0S6 344 aaPredicted RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 MINDY2Q8NBR6 621 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SRFBP1Q8NEF9 429 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 HUS1BQ8NHY5 278 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 EDAQ92838 391 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 DYNLL2Q96FJ2 89 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CCDC17Q96LX7 622 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 MS4A10Q96PG2 267 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 FICDQ9BVA6 458 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 SCNM1Q9BWG6 230 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 CADM1Q9BY67 442 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 MRPL37Q9BZE1 423 aaKnown RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 EGLN1Q9GZT9 426 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 METTL7AQ9H8H3 244 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 TMEM248Q9NWD8 314 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 KLHL8Q9P2G9 620 aaPredicted RBP5.36□□□□□ -1.55
DDB1-219ENST00000541513 VPS4AQ9UN37 437 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PLA2G4CQ9UP65 541 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 MGAT4BQ9UQ53 548 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 ENTPD4Q9Y227 616 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 STK38LQ9Y2H1 464 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PLIN4Q96Q06 1357 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PARP14Q460N5 1801 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 KIAA1217Q5T5P2 1943 aa5.36□□□□□ -1.55
DDB1-219ENST00000541513 PCNTO95613 3336 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms