RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PCDHB8Q9UN66 801 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 DHRS7Q9Y394 339 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRBV5-3A0A0A0MS03 114 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 RGS14O43566 566 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLDN7O95471 211 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 POU2F1P14859 743 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 HOXB8P17481 243 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ITPKAP23677 461 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 PTPN6P29350 595 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ALDH7A1P49419 539 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLK1P49759 484 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 DGUOKQ16854 277 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 SPATS1Q496A3 300 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 TSPAN33Q86UF1 283 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 APH1BQ8WW43 257 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 PPP3R2Q96LZ3 170 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 BBS2Q9BXC9 721 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 TLR8Q9NR97 1041 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 C14orf119Q9NWQ9 140 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 GAPDHSO14556 408 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 AP3D1O14617 1153 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RAD51BO15315 384 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RGS10O43665 173 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 PRAMEF4O60810 478 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 MTX2O75431 263 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ACVR2AP27037 513 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 S100A3P33764 101 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC19A1P41440 591 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCL23P55773 120 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 YBEYP58557 167 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 PCBP2Q15366 365 aaKnown RBP eCLIP10.08□□□□□ -0.87e-7■■■■■ 29.1
CDC42SE1-207ENST00000540998 ATAD3BQ5T9A4 648 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CACHD1Q5VU97 1274 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 AGAP7PQ5VUJ5 663 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 PRAMEF9Q5VWM5 478 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF621Q6ZSS3 439 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 HEATR4Q86WZ0 1026 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 STARD8Q92502 1023 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 REXO5Q96IC2 774 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 TMEM121BQ9BXQ6 578 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ARHGAP39Q9C0H5 1083 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLPBQ9H078 707 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATG10Q9H0Y0 220 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR51E2Q9H255 320 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 EHD1Q9H4M9 534 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RAD18Q9NS91 495 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RLIMQ9NVW2 624 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RFXANKO14593 260 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC16A6O15403 523 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SMAD6O43541 496 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SCELO95171 688 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 NPPAP01160 153 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ADRA2AP08913 450 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ALOX12P18054 663 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SDC1P18827 310 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATF6P18850 670 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR1E2P47887 323 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 NRIP1P48552 1158 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RPS14P62263 151 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RPP38P78345 283 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 MAD2L1BPQ15013 274 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 RTP2Q5QGT7 225 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 LRRC66Q68CR7 880 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 DESI1Q6ICB0 168 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR2T5Q6IEZ7 315 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM180BQ6P0A1 224 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 LYSMD2Q8IV50 215 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR2T29Q8NH02 315 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SELENOMQ8WWX9 145 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 HSH2DQ96JZ2 352 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 DUSP21Q9H596 190 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 KRT84Q9NSB2 600 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 IL17CQ9P0M4 197 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 BTBD3Q9Y2F9 522 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SNX8Q9Y5X2 465 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 MTMR11A4FU01 709 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC22A1O15245 554 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ACSL4O60488 711 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CYP7B1O75881 506 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ESR1P03372 595 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC10A3P09131 477 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCDC159P0C7I6 412 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 IDH2P48735 452 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 MRPL19P49406 292 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 DSC3Q14574 896 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 UAP1L1Q3KQV9 507 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ADAMTSL2Q86TH1 951 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 HORMAD1Q86X24 394 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 ENTHD1Q8IYW4 607 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CARNMT1Q8N4J0 409 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 CD244Q9BZW8 370 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 AASDHPPTQ9NRN7 309 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 GPR83Q9NYM4 423 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 TESMINQ9Y4I5 508 aa10.08□□□□□ -0.8
CDC42SE1-207ENST00000540998 M0R082 166 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms