RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 OR6C74A6NCV1 312 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 LILRA5A6NI73 299 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 RHPN2P1A8MT19 583 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PPP6CO00743 305 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 SH3BP5O60239 455 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PEBP1P30086 187 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 CLCQ05315 142 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 NR0B2Q15466 257 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 CFAP157Q5JU67 520 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 METTL2BQ6P1Q9 378 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 FRMD7Q6ZUT3 714 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GOLGA7Q7Z5G4 137 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 RAB3IL1Q8TBN0 382 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 LRRC8CQ8TDW0 803 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PPP4R1Q8TF05 950 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 C20orf27Q9GZN8 174 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 TWSG1Q9GZX9 223 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 DNAJC11Q9NVH1 559 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 SPHK1Q9NYA1 384 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 ARHGEF17Q96PE2 2063 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 FAM221BA6H8Z2 402 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 KLF11O14901 512 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GIPC1O14908 333 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 FLRT2O43155 660 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 ITM2AO43736 263 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PRICKLE3O43900 615 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 NPHS1O60500 1241 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 H2AFYO75367 372 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 CHRM5P08912 532 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 EPORP19235 508 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GRK2P25098 689 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PSMB5P28074 263 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GRK6P43250 576 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 STX3Q13277 289 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 SLC14A1Q13336 389 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GTF2H2Q13888 395 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 PROX2Q3B8N5 592 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 GTF2H2CQ6P1K8 395 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 ZNF438Q7Z4V0 828 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 LSMEM2Q8N112 164 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 OR10G6Q8NH81 332 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 TRPC4APQ8TEL6 797 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 CNDP1Q96KN2 507 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 ACAT2Q9BWD1 397 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 DRC3Q9H069 523 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 SEMA4BQ9NPR2 832 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 TAC3Q9UHF0 121 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 ANGPTL3Q9Y5C1 460 aa18.28■□□□□ 0.52
TNFRSF1A-213ENST00000540022 LYPLA1O75608 230 aaPredicted RBP18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CHRNGP07510 517 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 EPB42P16452 691 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NPPBP16860 134 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TYRP1P17643 537 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 POLR2CP19387 275 aaPredicted RBP18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CCND1P24385 295 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NOVA1P51513 510 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 RCN2Q14257 317 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 THEMIS2Q5TEJ8 643 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRAMEF13Q5VWM6 474 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ATG16L1Q676U5 607 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GUSBP11Q6P575 273 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SNX31Q8N9S9 440 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 RSC1A1Q92681 617 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CCDC134Q9H6E4 229 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 IPPKQ9H8X2 491 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SH2B3Q9UQQ2 575 aa18.27■□□□□ 0.51
TNFRSF1A-213ENST00000540022 A0A1B0GTL3 188 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PIPSLA2A3N6 862 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CPED1A4D0V7 1026 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TMEM114B3SHH9 223 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 UBFD1O14562 309 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 UBXN7O94888 489 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CSRP1P21291 193 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ALDH4A1P30038 563 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SLC1A6P48664 564 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ABCE1P61221 599 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 YBX1P67809 324 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NR1D2Q14995 579 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ARL13AQ5H913 290 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 LCTLQ6UWM7 567 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 RGS9BPQ6ZS82 235 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR6C4Q8NGE1 309 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR52B6Q8NGF0 335 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR2A1Q8NGT9 310 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 RHBDD1Q8TEB9 315 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SETD7Q8WTS6 366 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CCDC74AQ96AQ1 378 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 MIPEPQ99797 713 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SHCBP1LQ9BZQ2 653 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NOL11Q9H8H0 719 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 HRASLS2Q9NWW9 162 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ACACBO00763 2458 aa18.26■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR5K3A6NET4 321 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ISM1B1AKI9 464 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR7A17O14581 309 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 B4GAT1O43505 415 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRAMEF4O60810 478 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SNNO75324 88 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CKMT1AP12532 417 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms