RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TSSK1BQ9BXA7 367 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 RAB17Q9H0T7 212 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 SRMSQ9H3Y6 488 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 LATS2Q9NRM7 1088 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 PLAGL1Q9UM63 463 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 OSGIN2Q9Y236 505 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 PCDHGB7Q9Y5F8 929 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 ZG16O60844 167 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 TTC4O95801 387 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 UMODP07911 640 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 OGNP20774 298 aaKnown RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 ARNTP27540 789 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 GRNP28799 593 aaKnown RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 ARL4CP56559 192 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 RPA4Q13156 261 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 SEMA3AQ14563 771 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 DCAF10Q5QP82 559 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 NAPRTQ6XQN6 538 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 SHISA6Q6ZSJ9 500 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 SDCCAG8Q86SQ7 713 aaPredicted RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 LRRC6Q86X45 466 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 RAB43Q86YS6 212 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 ACVR1CQ8NER5 493 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 LRRC39Q96DD0 335 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 SIGLEC10Q96LC7 697 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 PHF12Q96QT6 1004 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 ERP44Q9BS26 406 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 P4HTMQ9NXG6 502 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 WHRNQ9P202 907 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 MARCH4Q9P2E8 410 aaPredicted RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 G3BP2Q9UN86 482 aaKnown RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 VPS9D1Q9Y2B5 631 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 KLHL20Q9Y2M5 609 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 UTP11Q9Y3A2 253 aaKnown RBP14.38□□□□□ -0.11
USB1-203ENST00000539737 MRFAP1Q9Y605 127 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
USB1-203ENST00000539737 C9J4A7 227 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 E7EQ34 232 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 PRMT5O14744 637 aaPredicted RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 KDM1AO60341 852 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 NDUFS3O75489 264 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 CD151P48509 253 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 RRADP55042 308 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 PLOD1Q02809 727 aaPredicted RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 THOC5Q13769 683 aaKnown RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 ELOAQ14241 798 aaKnown RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 MYBPC3Q14896 1274 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 LONRF1Q17RB8 773 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 TYSND1Q2T9J0 566 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 BBS9Q3SYG4 887 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 SYTL3Q4VX76 610 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 C8orf74Q6P047 294 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 LMNTD2Q8IXW0 634 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.11
USB1-203ENST00000539737 CLDN19Q8N6F1 224 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
USB1-203ENST00000539737 GABPB2Q8TAK5 448 aaPredicted RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 CALML6Q8TD86 181 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 TCF12Q99081 682 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
USB1-203ENST00000539737 FAM167BQ9BTA0 163 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 MVB12BQ9H7P6 319 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 COG4Q9H9E3 785 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 C1GALT1Q9NS00 363 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 SLC22A11Q9NSA0 550 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 SPHK1Q9NYA1 384 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 CIDEBQ9UHD4 219 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 GNPTGQ9UJJ9 305 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 ICKQ9UPZ9 632 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
USB1-203ENST00000539737 ZCWPW2A0A1B0GU75 182 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 H3BMH7 237 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 LIN7AO14910 233 aaPredicted RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 OR1I1O60431 355 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 RPS3P23396 243 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■□□□ 14.1
USB1-203ENST00000539737 FOLR3P41439 243 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 CRYMQ14894 314 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 SPANXN3Q5MJ09 141 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 ZNF470Q6ECI4 717 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 NEPROQ6NW34 567 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 Q6ZS92 163 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 KCNMB4Q86W47 210 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 CILP2Q8IUL8 1156 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 METTL27Q8N6F8 245 aaPredicted RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 ZNF655Q8N720 491 aaPredicted RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 CNDP1Q96KN2 507 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 TRIM56Q9BRZ2 755 aaKnown RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 PITPNM3Q9BZ71 974 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 SYTL2Q9HCH5 934 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 INTS10Q9NVR2 710 aaKnown RBP14.36□□□□□ -0.11
USB1-203ENST00000539737 NOVA2Q9UNW9 492 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms