RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KLHL35Q6PF15 583 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 ZCCHC23Q6ZST2 131 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 LRRC70Q7Z2Q7 622 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 CCNYL1Q8N7R7 359 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 NSUN5Q96P11 429 aaKnown RBP22.7■■□□□ 1.22
TMEM260-202ENST00000538838 CDC6Q99741 560 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 SLC32A1Q9H598 525 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 SH2B3Q9UQQ2 575 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 K7EPI3 171 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 E2F3O00716 465 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 BIRC5O15392 142 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 PRICKLE3O43900 615 aaPredicted RBP22.69■■□□□ 1.22
TMEM260-202ENST00000538838 TRIM13O60858 407 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 FGF3P11487 239 aaPredicted RBP22.69■■□□□ 1.22
TMEM260-202ENST00000538838 IMPDH1P20839 514 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 CCND1P24385 295 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 CD1CP29017 333 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 CSF2RBP32927 897 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 ACADVLP49748 655 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 NAGLUP54802 743 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 DNAJB13P59910 316 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 GPLD1P80108 840 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 PRKAA1Q13131 559 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 UNC50Q53HI1 259 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 FLVCR1-AS1Q8TAF5 88 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 ZMYND15Q9H091 742 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 EPB41L1Q9H4G0 881 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 SYNDIG1Q9H7V2 258 aa22.69■■□□□ 1.22
TMEM260-202ENST00000538838 INTS9Q9NV88 658 aaKnown RBP22.69■■□□□ 1.22
TMEM260-202ENST00000538838 C2orf74A8MZ97 194 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 TNFSF14O43557 240 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 SUPT7LO94864 414 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 RPLP0P05388 317 aaKnown RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 UGT2B7P16662 529 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 YBX1P67809 324 aaKnown RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 CCL7P80098 99 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 KIR2DS3Q14952 304 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 ARMC6Q6NXE6 501 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 FAM20CQ8IXL6 584 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 ARFGAP2Q8N6H7 521 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 TEX9Q8N6V9 391 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 SNX31Q8N9S9 440 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 DEFB124Q8NES8 71 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 OR2A1Q8NGT9 310 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 FAM76AQ8TAV0 307 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 NETO1Q8TDF5 533 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 ZNF483Q8TF39 744 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 NCSTNQ92542 709 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 OR2A14Q96R47 310 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GATA5Q9BWX5 397 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 C1QTNF3Q9BXJ4 246 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 DNAJC11Q9NVH1 559 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 UNC13CQ8NB66 2214 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 A0A1W2PQM1 296 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 BGNP21810 368 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GFERP55789 205 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 CFHR1Q03591 330 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GTF2H2Q13888 395 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 CHI3L2Q15782 390 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 PDK4Q16654 411 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 IRGCQ6NXR0 463 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GTF2H2CQ6P1K8 395 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GOLGA7Q7Z5G4 137 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 TRIM73Q86UV7 250 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 COL27A1Q8IZC6 1860 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 MIPEPQ99797 713 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 GSTO2Q9H4Y5 243 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 FAM53CQ9NYF3 392 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 POMT2Q9UKY4 750 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 ATXN7L1Q9ULK2 861 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-202ENST00000538838 PCDHB11Q9Y5F2 797 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 ENTPD2Q9Y5L3 495 aa22.68■■□□□ 1.22
TMEM260-202ENST00000538838 CAPN5O15484 640 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-202ENST00000538838 ZW10O43264 779 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 GP1BAP07359 652 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 NEFHP12036 1026 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 NPPBP16860 134 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 TSPAN8P19075 237 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 EPORP19235 508 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 CDH13P55290 713 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 ASPHQ12797 758 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 CDC16Q13042 620 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 LCTLQ6UWM7 567 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 USP53Q70EK8 1073 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 PPP4R1Q8TF05 950 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 SREK1Q8WXA9 508 aaKnown RBP22.67■■□□□ 1.22
TMEM260-202ENST00000538838 SLC22A18Q96BI1 424 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 PPM1MQ96MI6 270 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 NUDT22Q9BRQ3 303 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 ABCG4Q9H172 646 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 LRRN3Q9H3W5 708 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 ZBTB26Q9HCK0 441 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 SEMA4BQ9NPR2 832 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-202ENST00000538838 ANGPTL3Q9Y5C1 460 aa22.67■■□□□ 1.22
TMEM260-202ENST00000538838 MATN2O00339 956 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 PRDX3P30048 256 aaKnown RBP22.66■■□□□ 1.22
TMEM260-202ENST00000538838 CCR10P46092 362 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 SF1Q15637 639 aaKnown RBP22.66■■□□□ 1.22
TMEM260-202ENST00000538838 CFAP157Q5JU67 520 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 CES4AQ5XG92 561 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms