RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 IKZF3Q9UKT9 509 aa13.19□□□□□ -0.3
CD9-208ENST00000538834 SLC39A10Q9ULF5 831 aa13.19□□□□□ -0.3
CD9-208ENST00000538834 PDE10AQ9Y233 779 aa13.19□□□□□ -0.3
CD9-208ENST00000538834 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
CD9-208ENST00000538834 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
CD9-208ENST00000538834 OR2A25A4D2G3 310 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 ZBTB14O43829 449 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PIAS1O75925 651 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 C8GP07360 202 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 ZNF37AP17032 561 aaPredicted RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 PSMB5P28074 263 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 IMPA1P29218 277 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 CXADRP78310 365 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 GPS2Q13227 327 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PPP1R3AQ16821 1122 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PRAMEF17Q5VTA0 474 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 SBSNQ6UWP8 590 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 CEP97Q8IW35 865 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 DSELQ8IZU8 1212 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 GALNT6Q8NCL4 622 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 SMPDL3AQ92484 453 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 VPS39Q96JC1 886 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 BBC3Q96PG8 261 aaPredicted RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 GPR22Q99680 433 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 RBBP8Q99708 897 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 CPNE1Q99829 537 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 KLHL25Q9H0H3 589 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PARVBQ9HBI1 364 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 SOHLH2Q9NX45 425 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 IL17BQ9UHF5 180 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
CD9-208ENST00000538834 NOVA2Q9UNW9 492 aaKnown RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 MTO1Q9Y2Z2 717 aaKnown RBP13.18□□□□□ -0.3
CD9-208ENST00000538834 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 FAM95CA0A1B0GW59 222 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 FITM1A5D6W6 292 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 TMEM150CB9EJG8 249 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 CTSVO60911 334 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 CPNE3O75131 537 aaKnown RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 SCRG1O75711 98 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 ARL4DP49703 201 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 RGS4P49798 205 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 ITGA1P56199 1179 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 IL2P60568 153 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 PRDX1Q06830 199 aaKnown RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 ZKSCAN8Q15776 578 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 PHKG1Q16816 387 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 ARHGAP40Q5TG30 622 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 LCN10Q6JVE6 187 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 UBE2R2Q712K3 238 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 RNF44Q7L0R7 432 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 ARHGEF39Q8N4T4 335 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 CCDC138Q96M89 665 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 SGPP1Q9BX95 441 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 EURLQ9NYK6 297 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
CD9-208ENST00000538834 ANKMY1Q9P2S6 941 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 SERTAD3Q9UJW9 196 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
CD9-208ENST00000538834 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 HMX2A2RU54 273 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 NTRK1P04629 796 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 GP5P40197 560 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 POU4F1Q01851 419 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 RHDQ02161 417 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 NAB1Q13506 487 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 SF1Q15637 639 aaKnown RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 RHBDD2Q6NTF9 364 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 PAQR7Q86WK9 346 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 MCATQ8IVS2 390 aaKnown RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 RAB42Q8N4Z0 105 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 CEP112Q8N8E3 955 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 FBF1Q8TES7 1133 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 ANKRD49Q8WVL7 239 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 EFHD1Q9BUP0 239 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 SPRTNQ9H040 489 aaPredicted RBP13.16□□□□□ -0.3
CD9-208ENST00000538834 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
CD9-208ENST00000538834 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms