RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CAPN13Q6MZZ7 669 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 GPR180Q86V85 440 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 HM13Q8TCT9 377 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 PPM1MQ96MI6 270 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 VPS29Q9UBQ0 182 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 DNMT3AQ9Y6K1 912 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 FAM220BPB1ANY3 271 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 GPR89AB7ZAQ6 455 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 ZSCAN9O15535 394 aaPredicted RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 GPR89BP0CG08 455 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 RAP2AP10114 183 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 C6P13671 934 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 GAB4Q2WGN9 574 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 RAET1GQ6H3X3 334 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 SUSD1Q6UWL2 747 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 UNC5DQ6UXZ4 953 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 ARRDC3Q96B67 414 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 WRAP53Q9BUR4 548 aaKnown RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 EFCAB11Q9BUY7 163 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 MRPS26Q9BYN8 205 aaKnown RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 ANKRD60Q9BZ19 345 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 SEMA6AQ9H2E6 1030 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
SMG6-203ENST00000536871 THAP10Q9P2Z0 257 aaPredicted RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 MBD1Q9UIS9 605 aaPredicted RBP13.18□□□□□ -0.3
SMG6-203ENST00000536871 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ITPKAP23677 461 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 KIR3DL1P43629 444 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 NRIP1P48552 1158 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 PHEXP78562 749 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 MTAPQ13126 283 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 NAE1Q13564 534 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ZXDCQ2QGD7 858 aaPredicted RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 NOXRED1Q6NXP6 359 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ADGRD2Q7Z7M1 963 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 AMIGO2Q86SJ2 522 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 CHERPQ8IWX8 916 aaKnown RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 PYCR2Q96C36 320 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 BIRC7Q96CA5 298 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 CXorf40BQ96DE9 158 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 FAM129BQ96TA1 746 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 CIB1Q99828 191 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 ATG10Q9H0Y0 220 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 MTG2Q9H4K7 406 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 PNPLA3Q9NST1 481 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 FAM120CQ9NX05 1096 aaKnown RBP13.17□□□□□ -0.3
SMG6-203ENST00000536871 VAPAQ9P0L0 249 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 INVSQ9Y283 1065 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 DYRK1BQ9Y463 629 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
SMG6-203ENST00000536871 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RNF103-CHMP3A0A140T963 221 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RASAL1O95294 804 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 C1orf105O95561 183 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RPN2P04844 631 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RETP07949 1114 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SDC1P18827 310 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 HRH2P25021 359 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 TEAD1P28347 426 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 HSD17B2P37059 387 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 GRIA2P42262 883 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SLC6A11P48066 632 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ACSM2AQ08AH3 577 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ABHD18Q0P651 414 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RUNX3Q13761 415 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 HIST2H2ACQ16777 129 aaPredicted RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ACSM2BQ68CK6 577 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 HIST2H2AA3Q6FI13 130 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms