RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 GNAZP19086 355 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 CSRP1P21291 193 aaKnown RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ALDH3A1P30838 453 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 WDR4P57081 412 aaKnown RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 PRDX1Q06830 199 aaKnown RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 PCLAFQ15004 111 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 SLC5A12Q1EHB4 618 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 RSPO4Q2I0M5 234 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 PTCHD3Q3KNS1 767 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 CFAP157Q5JU67 520 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ZNF678Q5SXM1 525 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 C10orf62Q5T681 223 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ADGRF3Q8IZF5 1079 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ANKRD42Q8N9B4 389 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 LMNTD1Q8N9Z9 388 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 PPP4R1Q8TF05 950 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ZUFSPQ96AP4 578 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 PHF21BQ96EK2 531 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 CHRNA10Q9GZZ6 450 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 EML4Q9HC35 981 aaKnown RBP15.7■□□□□ 0.1
VAMP1-205ENST00000535927 HRASLS2Q9NWW9 162 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ANGPTL3Q9Y5C1 460 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 KLK4Q9Y5K2 254 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 U3KQA8 63 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 ASXL3Q9C0F0 2248 aa15.7■□□□□ 0.1
VAMP1-205ENST00000535927 RP1P56715 2156 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 IGHV1OR21-1A0A087WYE8 117 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 NCF1BA6NI72 391 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-205ENST00000535927 NCF1CA8MVU1 366 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-205ENST00000535927 TMEM114B3SHH9 223 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 SERPINE1P05121 402 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 NEFHP12036 1026 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 NCF1P14598 390 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-205ENST00000535927 CXCR2P25025 360 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 CASP2P42575 452 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 CAPZBP47756 277 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 TBCCQ15814 346 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 CCSMST1Q4G0I0 132 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 SPRED1Q7Z699 444 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 THOC6Q86W42 341 aaKnown RBP15.69■□□□□ 0.1
VAMP1-205ENST00000535927 C10orf107Q8IVU9 208 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 OR6Y1Q8NGX8 325 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 PPP1R14CQ8TAE6 165 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 EXT2Q93063 718 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 NTMT1Q9BV86 223 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 SNX7Q9UNH6 387 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 BTBD3Q9Y2F9 522 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-205ENST00000535927 DYRK1BQ9Y463 629 aa15.69■□□□□ 0.1
VAMP1-205ENST00000535927 CHD8Q9HCK8 2581 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 MAP1BP46821 2468 aaKnown RBP15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CPED1A4D0V7 1026 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 OR6C74A6NCV1 312 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 TMX2-CTNND1H3BSU7 103 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 E2F3O00716 465 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 GIPC1O14908 333 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CLGNO14967 610 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 MAP3K7O43318 606 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 B4GAT1O43505 415 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 SH3BP5O60239 455 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CPNE6O95741 557 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 OTCP00480 354 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CHN1P15882 459 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 NPPBP16860 134 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 KCNA4P22459 653 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 EEF1DP29692 281 aaKnown RBP15.68■□□□□ 0.1
VAMP1-205ENST00000535927 ALDH4A1P30038 563 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CMPK1P30085 196 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 HSPA7P48741 367 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 NAGLUP54802 743 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 PKNOX1P55347 436 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 TBPL1P62380 186 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CDC16Q13042 620 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 LAPTM5Q13571 262 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 GTF2H2Q13888 395 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 E2F2Q14209 437 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 PDK4Q16654 411 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 THEMIS2Q5TEJ8 643 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 PRAMEF13Q5VWM6 474 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 GTF2H2CQ6P1K8 395 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 RGS9BPQ6ZS82 235 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
VAMP1-205ENST00000535927 C17orf64Q86WR6 236 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 KMT5CQ86Y97 462 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 TBC1D19Q8N5T2 526 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 LINC01555Q8NAE3 123 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 ZNF483Q8TF39 744 aaPredicted RBP15.68■□□□□ 0.1
VAMP1-205ENST00000535927 DYDC1Q8WWB3 177 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CCDC74AQ96AQ1 378 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 GRAMD1AQ96CP6 724 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CNTNAP3BQ96NU0 1288 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 TMEM79Q9BSE2 394 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CNTNAP3Q9BZ76 1288 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 ATG10Q9H0Y0 220 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 CAAP1Q9H8G2 361 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 MANSC1Q9H8J5 431 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 C1GALT1Q9NS00 363 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 RXFP3Q9NSD7 469 aa15.68■□□□□ 0.1
VAMP1-205ENST00000535927 TMEM184CQ9NVA4 438 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms