RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 IFT80Q9P2H3 777 aaPredicted RBP16.73■□□□□ 0.27
BRCA2-204ENST00000530893 RFXANKO14593 260 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PSIP1O75475 530 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 CCNDBP1O95273 360 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 POLR2EP19388 210 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 MAP4P27816 1152 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 HALP42357 657 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 KIR3DL1P43629 444 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 C21orf58P58505 322 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PCDH1Q08174 1060 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 CHIT1Q13231 466 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PLCL1Q15111 1095 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 RFX4Q33E94 735 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 LDLRAP1Q5SW96 308 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 HENMT1Q5T8I9 393 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 ZNF773Q6PK81 442 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 DHRS4L2Q6PKH6 230 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SERPINA13PQ6UXR4 307 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 KLHDC8AQ8IYD2 350 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 C8orf59Q8N0T1 100 aaPredicted RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PGBD3Q8N328 593 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 ZNF555Q8NEP9 628 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 OR5K1Q8NHB7 308 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 NELL1Q92832 810 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 TBC1D20Q96BZ9 403 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 OTUB2Q96DC9 234 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 APIPQ96GX9 242 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 VPS35Q96QK1 796 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SOX17Q9H6I2 414 aaPredicted RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SLC6A13Q9NSD5 602 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 C3orf18Q9UK00 162 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PPT2Q9UMR5 302 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SAMD4AQ9UPU9 718 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 ERVW-1Q9UQF0 538 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 MYOFQ9NZM1 2061 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 UPK3BL1B0FP48 263 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 UPK3BL2E5RIL1 263 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SGTAO43765 313 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 CPNE6O95741 557 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 HSD3B1P14060 373 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 TACR1P25103 407 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 HSD3B2P26439 372 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 DCKP27707 260 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 VASPP50552 380 aaPredicted RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 IRF8Q02556 426 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PGS1Q32NB8 556 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 LRRC73Q5JTD7 316 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 HSD11B1LQ7Z5J1 315 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 FRS2Q8WU20 508 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 CLP1Q92989 425 aaKnown RBP16.72■□□□□ 0.27
BRCA2-204ENST00000530893 SCAMP4Q969E2 229 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 PYURFQ96I23 114 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 APOLD1Q96LR9 279 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 POLR1BQ9H9Y6 1135 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 FAM118AQ9NWS6 357 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 MARK1Q9P0L2 795 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 TMEM9Q9P0T7 183 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 MAPRE3Q9UPY8 281 aa16.72■□□□□ 0.27
BRCA2-204ENST00000530893 MTCL1Q9Y4B5 1905 aaKnown RBP16.71■□□□□ 0.27
BRCA2-204ENST00000530893 SERPINA1P01009 418 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 LINC00271P0C7V0 271 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 CDK4P11802 303 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 JUNBP17275 347 aaPredicted RBP16.71■□□□□ 0.27
BRCA2-204ENST00000530893 PTPN2P17706 415 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 ITPKAP23677 461 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 HNF4AP41235 474 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 MAGEA2P43356 314 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 DUOXA1Q1HG43 343 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 ZNF284Q2VY69 593 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 ZIK1Q3SY52 487 aaPredicted RBP16.71■□□□□ 0.27
BRCA2-204ENST00000530893 KCTD8Q6ZWB6 473 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 HIPK1Q86Z02 1210 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 KLHL23Q8NBE8 558 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 NETO1Q8TDF5 533 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 HDAC2Q92769 488 aaKnown RBP16.71■□□□□ 0.27
BRCA2-204ENST00000530893 GLMNQ92990 594 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 CCDC138Q96M89 665 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 INPP5KQ9BT40 448 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 TOR3AQ9H497 397 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 DKK3Q9UBP4 350 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 VPS29Q9UBQ0 182 aa16.71■□□□□ 0.27
BRCA2-204ENST00000530893 H0YIV9 168 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 PRAMEF4O60810 478 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 LEFTY1O75610 366 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 PMS2P3Q13401 168 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 DCTN2Q13561 401 aaKnown RBP16.7■□□□□ 0.26
BRCA2-204ENST00000530893 RAB39AQ14964 217 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 ZC3H12BQ5HYM0 836 aaKnown RBP16.7■□□□□ 0.26
BRCA2-204ENST00000530893 BROXQ5VW32 411 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 PRAMEF9Q5VWM5 478 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 ERICH5Q6P6B1 374 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 Q6ZVL8 140 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 OR8J2Q8NGG1 315 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 WDR20Q8TBZ3 569 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 BTN2A2Q8WVV5 523 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
BRCA2-204ENST00000530893 BRF2Q9HAW0 419 aa16.7■□□□□ 0.26
BRCA2-204ENST00000530893 PCDH12Q9NPG4 1184 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms