RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 FAM186AA6NE01 2351 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 A0A1W2PPV9 198 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CCDC189A1A4V9 331 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 RHPN2P1A8MT19 583 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 E7EQ34 232 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 K7EPI3 171 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CLGNO14967 610 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 NRP2O60462 931 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ALPPL2P10696 532 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 EPORP19235 508 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 NDUFS1P28331 727 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ALDH4A1P30038 563 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 PIK3CGP48736 1102 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 MEF2AQ02078 507 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 ASPHQ12797 758 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 COL9A2Q14055 689 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 PCBP2Q15366 365 aaKnown RBP eCLIP10.3□□□□□ -0.766e-6■■■■□ 21.2
SOX6-213ENST00000530378 AMZ1Q400G9 498 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 PRAMEF13Q5VWM6 474 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ATG16L1Q676U5 607 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CLEC6AQ6EIG7 209 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CAPN13Q6MZZ7 669 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 LRRC70Q7Z2Q7 622 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 TMPRSS11BQ86T26 416 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 RAB42Q8N4Z0 105 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ZNF781Q8N8C0 355 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 OR56A3Q8NH54 315 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 OR4C6Q8NH72 309 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SETD7Q8WTS6 366 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 PPP1R36Q96LQ0 422 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 PPM1MQ96MI6 270 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SLC38A3Q99624 504 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 MIPEPQ99797 713 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 KLHL25Q9H0H3 589 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 STN1Q9H668 368 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 IPPKQ9H8X2 491 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 MID1IP1Q9NPA3 183 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 PNPOQ9NVS9 261 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CUEDC1Q9NWM3 386 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 SPATA7Q9P0W8 599 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 LRIT1Q9P2V4 623 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 TNPO3Q9Y5L0 923 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 ISM1B1AKI9 464 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 AGRPO00253 132 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 OR7A17O14581 309 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 FFAR3O14843 346 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 YKT6O15498 198 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 GPR42O15529 346 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 GDF9O60383 454 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CHRM5P08912 532 aaPredicted RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 ZNF806P0C7X5 589 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 ERGP11308 486 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 EPB42P16452 691 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 SHMT2P34897 504 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 NBL1P41271 181 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CCNG1P51959 295 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 FOXA1P55317 472 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 OR1D5P58170 312 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CDC16Q13042 620 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 LCP2Q13094 533 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CYP2A13Q16696 494 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 AASDHQ4L235 1098 aaPredicted RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 TCHHL1Q5QJ38 904 aaPredicted RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 SH2D4BQ5SQS7 431 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 ZCCHC8Q6NZY4 707 aaKnown RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 GUSBP11Q6P575 273 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 SYVN1Q86TM6 617 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CUZD1Q86UP6 607 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 TRIM42Q8IWZ5 723 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 ADGRF3Q8IZF5 1079 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 OR6Y1Q8NGX8 325 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 OR2L8Q8NGY9 312 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 SMPDL3AQ92484 453 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 NEIL2Q969S2 332 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 CCDC74AQ96AQ1 378 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 DRC3Q9H069 523 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 SLC32A1Q9H598 525 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 PRM3Q9NNZ6 103 aa10.29□□□□□ -0.76
SOX6-213ENST00000530378 MDC1Q14676 2089 aaKnown RBP10.29□□□□□ -0.76
SOX6-213ENST00000530378 LY6G6EA0A0G2JKS1 128 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 TMEM114B3SHH9 223 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 DFNA5O60443 496 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 NPHS1O60500 1241 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 PRAMEF4O60810 478 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 SNNO75324 88 aaPredicted RBP10.28□□□□□ -0.76
SOX6-213ENST00000530378 H2AFYO75367 372 aaKnown RBP10.28□□□□□ -0.76
SOX6-213ENST00000530378 OR4F21O95013 312 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 CDH1P12830 882 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 GRK2P25098 689 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 SERPINB3P29508 390 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 GGT5P36269 586 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 FASLGP48023 281 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 SH3BP2P78314 561 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 OCRLQ01968 901 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 TRAF3Q13114 568 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 CCDC157Q569K6 752 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
SOX6-213ENST00000530378 CATSPEREQ5SY80 951 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms