RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 TEX35Q5T0J7 233 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 UBAP2Q5T6F2 1119 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 CASC4Q6P4E1 433 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 ENPP7Q6UWV6 458 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 C11orf96Q7Z7L8 435 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 SERPINA9Q86WD7 417 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 UNC5BQ8IZJ1 945 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 RBFAQ8N0V3 343 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MINDY1Q8N5J2 469 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 FBXO36Q8NEA4 188 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 OR14K1Q8NGZ2 314 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 OR4L1Q8NH43 312 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 SKA1Q96BD8 255 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 RHOXF2Q9BQY4 288 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 EDEM2Q9BV94 578 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 LRRC61Q9BV99 259 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 BOCQ9BWV1 1114 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 FAM96AQ9H5X1 160 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 ANKZF1Q9H8Y5 726 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 TRIM39Q9HCM9 518 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MRPL40Q9NQ50 206 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 IL1RAPL1Q9NZN1 696 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 SAMD15Q9P1V8 674 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 ATXN10Q9UBB4 475 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 KLQ9UEF7 1012 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MAD1L1Q9Y6D9 718 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 RPS6KL1Q9Y6S9 549 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 DGKBQ9Y6T7 804 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 TMEM131Q92545 1883 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 USP24Q9UPU5 2620 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 DSPP15924 2871 aaKnown RBP8.59□□□□□ -1.04
CCDC90B-217ENST00000530253 PRSS38A1L453 326 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 GOLGA8KD6RF30 607 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 GOLGA8TH3BQL2 631 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 PIAS2O75928 621 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 VAPBO95292 243 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CER1O95813 267 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF883P0CG24 379 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 MYBL2P10244 700 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF8P17098 575 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 HTR1BP28222 390 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 TNFRSF8P28908 595 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 HK3P52790 923 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CTSCP53634 463 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SRP54P61011 504 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 PRAMEP78395 509 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CUL1Q13616 776 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ITIH4Q14624 930 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 TYSND1Q2T9J0 566 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 PYCR3Q53H96 274 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF542PQ5EBM4 170 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ZRANB3Q5FWF4 1079 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SPANXN3Q5MJ09 141 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 LDLRAP1Q5SW96 308 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 DOK6Q6PKX4 331 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 IL27RAQ6UWB1 636 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 PACS1Q6VY07 963 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CENPUQ71F23 418 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 LDB1Q86U70 411 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF547Q8IVP9 402 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 RASGEF1AQ8N9B8 481 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 GPR150Q8NGU9 434 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CALML6Q8TD86 181 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SAP25Q8TEE9 199 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 NAT14Q8WUY8 206 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 TSACCQ96A04 125 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 ULK4Q96C45 1275 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 NAT9Q9BTE0 207 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 GTPBP2Q9BX10 602 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CLPBQ9H078 707 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 OR2AG1Q9H205 316 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 GAREM1Q9H706 876 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SAYSD1Q9NPB0 183 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 DNAJC28Q9NX36 388 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 APOBEC3BQ9UH17 382 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CRLS1Q9UJA2 301 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 CBLCQ9ULV8 474 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SUFUQ9UMX1 484 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 VWA7Q9Y334 891 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 MAP1BP46821 2468 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 KNL1Q8NG31 2342 aa8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-217ENST00000530253 SPEGQ15772 3267 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 ASCC3Q8N3C0 2202 aaKnown RBP8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 IGF2RP11717 2491 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 CHD6Q8TD26 2715 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 GPR89AB7ZAQ6 455 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 SCAMP1O15126 338 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 CD3EAPO15446 510 aaKnown RBP8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 VEGFDO43915 354 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 PCDHGA12O60330 932 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 DFNA5O60443 496 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 SDC3O75056 442 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 SLC25A14O95258 325 aaPredicted RBP8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 RASGRP1O95267 797 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 TTC4O95801 387 aa8.57□□□□□ -1.04
CCDC90B-217ENST00000530253 MPIG6BO95866 241 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms