RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 MRM3Q9HC36 420 aaKnown RBP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 CHRAC1Q9NRG0 131 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 BFARQ9NZS9 450 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 IFT80Q9P2H3 777 aaPredicted RBP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 ICKQ9UPZ9 632 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 CDYLQ9Y232 598 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 AP1M2Q9Y6Q5 423 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 PCSK5Q92824 1860 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 PCM1Q15154 2024 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-203ENST00000527916 AGPSO00116 658 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 PRMT5O14744 637 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-203ENST00000527916 KPNA5O15131 536 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CD3EAPO15446 510 aaKnown RBP10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CEP104O60308 925 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 SNRNP200O75643 2136 aaKnown RBP10.11□□□□□ -0.79
CPSF1-203ENST00000527916 SLCO2B1O94956 709 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 TPBGLP0DKB5 382 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 TPSB2P20231 275 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 AOAHP28039 575 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CCR7P32248 378 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 DCDP81605 110 aaKnown RBP10.11□□□□□ -0.79
CPSF1-203ENST00000527916 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 KIR2DS3Q14952 304 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 BRD3Q15059 726 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 TPSAB1Q15661 275 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 SLC5A12Q1EHB4 618 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 SYTL3Q4VX76 610 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 PRAMEF13Q5VWM6 474 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 LRRC8BQ6P9F7 803 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 IGFL2Q6UWQ7 119 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CDH24Q86UP0 819 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 LRRC6Q86X45 466 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 FLVCR1-AS1Q8TAF5 88 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 PROKR1Q8TCW9 393 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 PANX3Q96QZ0 392 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 HGH1Q9BTY7 390 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 KIFC1Q9BW19 673 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 P2RY12Q9H244 342 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 XKR8Q9H6D3 395 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CATSPERZQ9NTU4 200 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 PPP2R2CQ9Y2T4 447 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 JRKLQ9Y4A0 524 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 CSAG2Q9Y5P2 127 aa10.11□□□□□ -0.79
CPSF1-203ENST00000527916 TRGV8A0A0C4DH27 118 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 H3BMH7 237 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 DIAPH2O60879 1101 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 OR2B3O76000 313 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 RPN2P04844 631 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 APOA4P06727 396 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 RPS3P23396 243 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 MAGEA6P43360 314 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 KCNJ1P48048 391 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 ADARP55265 1226 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 SESN2P58004 480 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 BASP1P80723 227 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 SARNPP82979 210 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF385CQ66K41 422 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 RPUSD3Q6P087 351 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 XKRXQ6PP77 449 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 TMEM207Q6UWW9 146 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 UNC5DQ6UXZ4 953 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 PPP1R32Q7Z5V6 425 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 RASGEF1CQ8N431 466 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 PRELID2Q8N945 189 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 C19orf47Q8N9M1 422 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 SLC22A18Q96BI1 424 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 CCDC120Q96HB5 630 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 VPS50Q96JG6 964 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 PBKQ96KB5 322 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 MAGEB10Q96LZ2 347 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 TCF12Q99081 682 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 NRTNQ99748 197 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 MENTQ9BUN1 341 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 TTC7AQ9ULT0 858 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 TDRKHQ9Y2W6 561 aaKnown RBP10.1□□□□□ -0.79
CPSF1-203ENST00000527916 MRFAP1Q9Y605 127 aa10.1□□□□□ -0.79
CPSF1-203ENST00000527916 CACNA1CQ13936 2221 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 A0A0J9YY10 115 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 MAGEB16A2A368 324 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CCL21O00585 134 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 PCDH17O14917 1159 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 PFDN6O15212 129 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 FKBP9O95302 570 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CBSLP0DN79 551 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 MLNP12872 115 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CD1EP15812 388 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 UGT2B7P16662 529 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 NMBRP28336 390 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CXCR5P32302 372 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CBSP35520 551 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 GABRA4P48169 554 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 RAB28P51157 221 aa10.09□□□□□ -0.79
CPSF1-203ENST00000527916 CASP6P55212 293 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms