RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ACAP2Q15057 778 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 CDKL4Q5MAI5 379 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 RAB11FIP2Q7L804 512 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 KMT5CQ86Y97 462 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 KLHDC8AQ8IYD2 350 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 D2HGDHQ8N465 521 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 AGBL5Q8NDL9 886 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 OR2L3Q8NG85 312 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 WDR36Q8NI36 951 aaKnown RBP16.04■□□□□ 0.16
SMCO4-204ENST00000527149 SLC22A18Q96BI1 424 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 RHBDF1Q96CC6 855 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 CABS1Q96KC9 395 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 HIST1H2AHQ96KK5 128 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 HIST1H2AJQ99878 128 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 TMEM79Q9BSE2 394 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 H2AFJQ9BTM1 129 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 TRIM54Q9BYV2 358 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 SLC6A20Q9NP91 592 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 OCIAD1Q9NX40 245 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 SH2B3Q9UQQ2 575 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 PCDHGA8Q9Y5G5 932 aa16.04■□□□□ 0.16
SMCO4-204ENST00000527149 IGKV1-8A0A0C4DH67 115 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 GOLGA8RI6L899 631 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 PLD2O14939 933 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 TAPBPO15533 448 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ZBTB11O95625 1053 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 SBK3P0C264 359 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 PYGBP11216 843 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 FGF3P11487 239 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ITIH1P19827 911 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 MAGP20916 626 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 SLC6A12P48065 614 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 SH3BP2P78314 561 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 IFFO1Q0D2I5 559 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 NAE1Q13564 534 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 RTP5Q14D33 572 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 C3orf38Q5JPI3 329 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 KIAA1614Q5VZ46 1190 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 FRA10AC1Q70Z53 315 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 TMEM151AQ8N4L1 468 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 C19orf47Q8N9M1 422 aaKnown RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 STAG3L4Q8TBR4 150 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 GATA6Q92908 595 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ZIM3Q96PE6 472 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 OR4K3Q96R72 315 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 CMKLR1Q99788 373 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ACAT2Q9BWD1 397 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 NRSN2Q9GZP1 204 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 CHRNA10Q9GZZ6 450 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 KLHL25Q9H0H3 589 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ATG10Q9H0Y0 220 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 NUDT4Q9NZJ9 180 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 XPR1Q9UBH6 696 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 TAC3Q9UHF0 121 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 ANGPTL2Q9UKU9 493 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 RNF112Q9ULX5 631 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 KLHL20Q9Y2M5 609 aa16.03■□□□□ 0.16
SMCO4-204ENST00000527149 MDC1Q14676 2089 aaKnown RBP16.03■□□□□ 0.16
SMCO4-204ENST00000527149 SEC16AO15027 2179 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 TLDC2A0PJX2 215 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 B4E171 279 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 UBXN8O00124 270 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 TK2O00142 265 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 AGRPO00253 132 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 KLK8O60259 260 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 NRP2O60462 931 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 MT-ND3P03897 115 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 ANXA5P08758 320 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 CSTF2P33240 577 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMCO4-204ENST00000527149 GGT5P36269 586 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 TSPAN7P41732 249 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 GRIA3P42263 894 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 GABRA4P48169 554 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 HNMTP50135 292 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 GABREP78334 506 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 KCNAB1Q14722 419 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 TSNAXIP1Q2TAA8 658 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 PTCHD3Q3KNS1 767 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 PRAMEF13Q5VWM6 474 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 ICE2Q659A1 982 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 CDHR3Q6ZTQ4 885 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 TRABD2AQ86V40 505 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 LCA5Q86VQ0 697 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 FBXO39Q8N4B4 442 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 UBTD2Q8WUN7 234 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 ATL1Q8WXF7 558 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 EXT2Q93063 718 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 PYCR2Q96C36 320 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 MIPEPQ99797 713 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 FAM60AQ9NP50 221 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 INTS7Q9NVH2 962 aaKnown RBP16.02■□□□□ 0.16
SMCO4-204ENST00000527149 PTBP2Q9UKA9 531 aaKnown RBP16.02■□□□□ 0.16
SMCO4-204ENST00000527149 ASB1Q9Y576 335 aa16.02■□□□□ 0.16
SMCO4-204ENST00000527149 PCDHB11Q9Y5F2 797 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms